RNA–Protein interactions for RNA: ENST00000376736.5

RFK-201, Transcript of riboflavin kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFK, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFK-201ENST00000376736 NISCHQ9Y2I1 1504 aa34.32■■■■□ 3.09
RFK-201ENST00000376736 CCDC180Q9P1Z9 1646 aa29.91■■■□□ 2.38
RFK-201ENST00000376736 ABCC9O60706 1549 aa28.87■■■□□ 2.21
RFK-201ENST00000376736 ZCCHC6Q5VYS8 1495 aaKnown RBP28.74■■■□□ 2.19
RFK-201ENST00000376736 DCAF8L2P0C7V8 631 aa28.74■■■□□ 2.19
RFK-201ENST00000376736 DCAF1Q9Y4B6 1507 aa28.23■■■□□ 2.11
RFK-201ENST00000376736 SHROOM4Q9ULL8 1493 aa28.06■■■□□ 2.08
RFK-201ENST00000376736 NACADO15069 1562 aa27.99■■■□□ 2.07
RFK-201ENST00000376736 MYO15BQ96JP2 1530 aa27.97■■■□□ 2.07
RFK-201ENST00000376736 RB1CC1Q8TDY2 1594 aa27.84■■■□□ 2.05
RFK-201ENST00000376736 SCRIBQ14160 1630 aa27.69■■■□□ 2.02
RFK-201ENST00000376736 UNC13AQ9UPW8 1703 aa27.36■■□□□ 1.97
RFK-201ENST00000376736 PABPN1Q86U42 306 aaKnown RBP eCLIP27.27■■□□□ 1.96
RFK-201ENST00000376736 BICRAQ9NZM4 1560 aa27.13■■□□□ 1.93
RFK-201ENST00000376736 SUPT5HO00267 1087 aaKnown RBP26.96■■□□□ 1.91
RFK-201ENST00000376736 CECR2Q9BXF3 1484 aa26.85■■□□□ 1.89
RFK-201ENST00000376736 MROH2BQ7Z745 1585 aa26.59■■□□□ 1.85
RFK-201ENST00000376736 RSF1Q96T23 1441 aaPredicted RBP26.58■■□□□ 1.85
RFK-201ENST00000376736 HRCP23327 699 aa26.52■■□□□ 1.84
RFK-201ENST00000376736 BAZ1AQ9NRL2 1556 aaPredicted RBP26.47■■□□□ 1.83
RFK-201ENST00000376736 SMARCA4P51532 1647 aa26.43■■□□□ 1.82
RFK-201ENST00000376736 WIZO95785 1651 aa26.36■■□□□ 1.81
RFK-201ENST00000376736 CHIC1Q5VXU3 224 aa26.35■■□□□ 1.81
RFK-201ENST00000376736 EIF4G1Q04637 1599 aaKnown RBP26.3■■□□□ 1.8
RFK-201ENST00000376736 PCGF6Q9BYE7 350 aa26.26■■□□□ 1.79
RFK-201ENST00000376736 ATAD2BQ9ULI0 1458 aa26.13■■□□□ 1.77
RFK-201ENST00000376736 PPARGC1BQ86YN6 1023 aaKnown RBP26.11■■□□□ 1.77
RFK-201ENST00000376736 PEG3Q9GZU2 1588 aa26.04■■□□□ 1.76
RFK-201ENST00000376736 CC2D2AQ9P2K1 1620 aa26.03■■□□□ 1.76
RFK-201ENST00000376736 SMARCA2P51531 1590 aa25.99■■□□□ 1.75
RFK-201ENST00000376736 TOP2AP11388 1531 aaKnown RBP25.95■■□□□ 1.74
RFK-201ENST00000376736 BAZ1BQ9UIG0 1483 aaKnown RBP25.93■■□□□ 1.74
RFK-201ENST00000376736 DNAJC5BQ9UF47 199 aa25.91■■□□□ 1.74
RFK-201ENST00000376736 NCAPD3P42695 1498 aa25.9■■□□□ 1.74
RFK-201ENST00000376736 CCDC88BA6NC98 1476 aa25.8■■□□□ 1.72
RFK-201ENST00000376736 LOC105371045A0A1W2PR82 267 aa25.79■■□□□ 1.72
RFK-201ENST00000376736 HMGXB3Q12766 1538 aa25.76■■□□□ 1.71
RFK-201ENST00000376736 TRIM26Q12899 539 aaPredicted RBP25.44■■□□□ 1.66
RFK-201ENST00000376736 NESP48681 1621 aa25.27■■□□□ 1.64
RFK-201ENST00000376736 CADPSQ9ULU8 1353 aa25.26■■□□□ 1.63
RFK-201ENST00000376736 CFTRP13569 1480 aa25.26■■□□□ 1.63
RFK-201ENST00000376736 ABCC8Q09428 1581 aa25.21■■□□□ 1.63
RFK-201ENST00000376736 TRIM41Q8WV44 630 aa25.13■■□□□ 1.61
RFK-201ENST00000376736 ZEB1P37275 1124 aaPredicted RBP25.02■■□□□ 1.6
RFK-201ENST00000376736 LAMC3Q9Y6N6 1575 aa25.01■■□□□ 1.59
RFK-201ENST00000376736 FANCD2Q9BXW9 1451 aa24.99■■□□□ 1.59
RFK-201ENST00000376736 WRNQ14191 1432 aaPredicted RBP eCLIP24.99■■□□□ 1.59
RFK-201ENST00000376736 PELP1Q8IZL8 1130 aaKnown RBP24.99■■□□□ 1.59
RFK-201ENST00000376736 PRDM2Q13029 1718 aa24.97■■□□□ 1.59
RFK-201ENST00000376736 FAM9AQ8IZU1 332 aaPredicted RBP24.95■■□□□ 1.58
RFK-201ENST00000376736 SYNJ1O43426 1573 aa24.93■■□□□ 1.58
RFK-201ENST00000376736 SCAF1Q9H7N4 1312 aaKnown RBP24.92■■□□□ 1.58
RFK-201ENST00000376736 EHMT2Q96KQ7 1210 aa24.89■■□□□ 1.57
RFK-201ENST00000376736 PDS5BQ9NTI5 1447 aa24.88■■□□□ 1.57
RFK-201ENST00000376736 CUX1P39880 1505 aa24.86■■□□□ 1.57
RFK-201ENST00000376736 KIF21AQ7Z4S6 1674 aa24.85■■□□□ 1.57
RFK-201ENST00000376736 CEP164Q9UPV0 1460 aa24.82■■□□□ 1.56
RFK-201ENST00000376736 TOP2BQ02880 1626 aa24.76■■□□□ 1.55
RFK-201ENST00000376736 URB2Q14146 1524 aaKnown RBP24.73■■□□□ 1.55
RFK-201ENST00000376736 BIVM-ERCC5R4GMW8 1640 aa24.71■■□□□ 1.55
RFK-201ENST00000376736 SOGA1O94964 1423 aa24.69■■□□□ 1.54
RFK-201ENST00000376736 ERCC6Q03468 1493 aa24.69■■□□□ 1.54
RFK-201ENST00000376736 TOPBP1Q92547 1522 aa24.68■■□□□ 1.54
RFK-201ENST00000376736 RUSC2Q8N2Y8 1516 aa24.67■■□□□ 1.54
RFK-201ENST00000376736 FGD5Q6ZNL6 1462 aa24.63■■□□□ 1.53
RFK-201ENST00000376736 DNMBPQ6XZF7 1577 aa24.63■■□□□ 1.53
RFK-201ENST00000376736 MRC2Q9UBG0 1479 aa24.58■■□□□ 1.53
RFK-201ENST00000376736 RAD54L2Q9Y4B4 1467 aa24.56■■□□□ 1.52
RFK-201ENST00000376736 POLA1P09884 1462 aaPredicted RBP24.55■■□□□ 1.52
RFK-201ENST00000376736 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.49■■□□□ 1.51
RFK-201ENST00000376736 THOC2Q8NI27 1593 aaKnown RBP24.47■■□□□ 1.51
RFK-201ENST00000376736 WDR62O43379 1518 aa24.45■■□□□ 1.5
RFK-201ENST00000376736 CUX2O14529 1486 aa24.42■■□□□ 1.5
RFK-201ENST00000376736 CSRNP3Q8WYN3 585 aa24.42■■□□□ 1.5
RFK-201ENST00000376736 NEUROD1Q13562 356 aa24.39■■□□□ 1.49
RFK-201ENST00000376736 CCER1Q8TC90 406 aaPredicted RBP24.38■■□□□ 1.49
RFK-201ENST00000376736 ACIN1Q9UKV3 1341 aaKnown RBP24.38■■□□□ 1.49
RFK-201ENST00000376736 TDRD9Q8NDG6 1382 aaKnown RBP24.37■■□□□ 1.49
RFK-201ENST00000376736 KIF27Q86VH2 1401 aa24.35■■□□□ 1.49
RFK-201ENST00000376736 ABCA10Q8WWZ4 1543 aa24.33■■□□□ 1.49
RFK-201ENST00000376736 EEA1Q15075 1411 aa24.31■■□□□ 1.48
RFK-201ENST00000376736 TARBP1Q13395 1621 aaKnown RBP24.31■■□□□ 1.48
RFK-201ENST00000376736 ZNF608Q9ULD9 1512 aaPredicted RBP24.26■■□□□ 1.47
RFK-201ENST00000376736 IGF1RP08069 1367 aa24.26■■□□□ 1.47
RFK-201ENST00000376736 AQRO60306 1485 aaKnown RBP eCLIP24.25■■□□□ 1.472e-6■■■■□ 24.5
RFK-201ENST00000376736 WDR97A6NE52 1622 aa24.25■■□□□ 1.47
RFK-201ENST00000376736 IFT140Q96RY7 1462 aa24.21■■□□□ 1.47
RFK-201ENST00000376736 DIEXFQ68CQ4 756 aaKnown RBP24.21■■□□□ 1.47
RFK-201ENST00000376736 GTF3C3Q9Y5Q9 886 aa24.2■■□□□ 1.46
RFK-201ENST00000376736 TTBK1Q5TCY1 1321 aaPredicted RBP24.19■■□□□ 1.46
RFK-201ENST00000376736 GAPVD1Q14C86 1478 aa24.18■■□□□ 1.46
RFK-201ENST00000376736 RAPGEF2Q9Y4G8 1499 aa24.16■■□□□ 1.46
RFK-201ENST00000376736 ABCA5Q8WWZ7 1642 aa24.15■■□□□ 1.46
RFK-201ENST00000376736 UBTFP17480 764 aaKnown RBP24.14■■□□□ 1.45
RFK-201ENST00000376736 PRXQ9BXM0 1461 aa24.12■■□□□ 1.45
RFK-201ENST00000376736 CARMIL1Q5VZK9 1371 aa24.1■■□□□ 1.45
RFK-201ENST00000376736 KIF21BO75037 1637 aa24.07■■□□□ 1.44
RFK-201ENST00000376736 CENPBP07199 599 aaPredicted RBP24.06■■□□□ 1.44
RFK-201ENST00000376736 GOLGA3Q08378 1498 aa24.06■■□□□ 1.44
RFK-201ENST00000376736 EIF4G3O43432 1585 aaKnown RBP24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms