Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PARPBPQ9NWS1 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PARPBPQ9NWS1 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PARPBPQ9NWS1 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PARPBPQ9NWS1 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PARPBPQ9NWS1 AC239859.2-201ENST00000444165 318 ntBASIC20.56■□□□□ 0.88
PARPBPQ9NWS1 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.56■□□□□ 0.88
PARPBPQ9NWS1 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PARPBPQ9NWS1 AC021242.3-201ENST00000607598 1377 ntBASIC20.56■□□□□ 0.88
PARPBPQ9NWS1 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
PARPBPQ9NWS1 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PARPBPQ9NWS1 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PARPBPQ9NWS1 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PARPBPQ9NWS1 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.55■□□□□ 0.88
PARPBPQ9NWS1 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.55■□□□□ 0.88
PARPBPQ9NWS1 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.55■□□□□ 0.88
PARPBPQ9NWS1 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.55■□□□□ 0.88
PARPBPQ9NWS1 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PARPBPQ9NWS1 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PARPBPQ9NWS1 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PARPBPQ9NWS1 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.55■□□□□ 0.88
PARPBPQ9NWS1 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PARPBPQ9NWS1 AF131216.4-201ENST00000638924 1588 ntBASIC20.55■□□□□ 0.88
PARPBPQ9NWS1 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PARPBPQ9NWS1 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.54■□□□□ 0.88
PARPBPQ9NWS1 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PARPBPQ9NWS1 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
PARPBPQ9NWS1 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.54■□□□□ 0.88
PARPBPQ9NWS1 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PARPBPQ9NWS1 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.54■□□□□ 0.88
PARPBPQ9NWS1 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
PARPBPQ9NWS1 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PARPBPQ9NWS1 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
PARPBPQ9NWS1 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PARPBPQ9NWS1 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.53■□□□□ 0.88
PARPBPQ9NWS1 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PARPBPQ9NWS1 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.53■□□□□ 0.88
PARPBPQ9NWS1 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.53■□□□□ 0.88
PARPBPQ9NWS1 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.53■□□□□ 0.88
PARPBPQ9NWS1 MIR4787-201ENST00000607364 84 ntBASIC20.53■□□□□ 0.88
PARPBPQ9NWS1 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.53■□□□□ 0.88
PARPBPQ9NWS1 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.53■□□□□ 0.88
PARPBPQ9NWS1 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.53■□□□□ 0.88
PARPBPQ9NWS1 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.52■□□□□ 0.88
PARPBPQ9NWS1 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PARPBPQ9NWS1 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
PARPBPQ9NWS1 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.52■□□□□ 0.88
PARPBPQ9NWS1 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.52■□□□□ 0.88
PARPBPQ9NWS1 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.52■□□□□ 0.88
PARPBPQ9NWS1 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.52■□□□□ 0.88
PARPBPQ9NWS1 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PARPBPQ9NWS1 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.52■□□□□ 0.88
PARPBPQ9NWS1 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PARPBPQ9NWS1 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PARPBPQ9NWS1 HLA-L-211ENST00000482052 1765 ntBASIC20.51■□□□□ 0.87
PARPBPQ9NWS1 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
PARPBPQ9NWS1 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PARPBPQ9NWS1 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.51■□□□□ 0.87
PARPBPQ9NWS1 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
PARPBPQ9NWS1 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
PARPBPQ9NWS1 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PARPBPQ9NWS1 AL161729.1-201ENST00000604104 1402 ntBASIC20.51■□□□□ 0.87
PARPBPQ9NWS1 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PARPBPQ9NWS1 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PARPBPQ9NWS1 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PARPBPQ9NWS1 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PARPBPQ9NWS1 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PARPBPQ9NWS1 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PARPBPQ9NWS1 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PARPBPQ9NWS1 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.5■□□□□ 0.87
PARPBPQ9NWS1 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
PARPBPQ9NWS1 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PARPBPQ9NWS1 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
PARPBPQ9NWS1 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PARPBPQ9NWS1 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PARPBPQ9NWS1 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
PARPBPQ9NWS1 AL022069.1-201ENST00000568025 1636 ntBASIC20.49■□□□□ 0.87
PARPBPQ9NWS1 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
PARPBPQ9NWS1 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PARPBPQ9NWS1 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
PARPBPQ9NWS1 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PARPBPQ9NWS1 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.49■□□□□ 0.87
PARPBPQ9NWS1 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.49■□□□□ 0.87
PARPBPQ9NWS1 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PARPBPQ9NWS1 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PARPBPQ9NWS1 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PARPBPQ9NWS1 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PARPBPQ9NWS1 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.48■□□□□ 0.87
PARPBPQ9NWS1 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PARPBPQ9NWS1 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PARPBPQ9NWS1 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.48■□□□□ 0.87
PARPBPQ9NWS1 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PARPBPQ9NWS1 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PARPBPQ9NWS1 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PARPBPQ9NWS1 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PARPBPQ9NWS1 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PARPBPQ9NWS1 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PARPBPQ9NWS1 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.47■□□□□ 0.87
PARPBPQ9NWS1 AC092028.1-203ENST00000608262 953 ntBASIC20.47■□□□□ 0.87
PARPBPQ9NWS1 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms