Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.85■■□□□ 1.09
PRDM9Q9NQV7 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PRDM9Q9NQV7 AC021242.3-201ENST00000607598 1377 ntBASIC21.85■■□□□ 1.09
PRDM9Q9NQV7 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
PRDM9Q9NQV7 LINC01124-201ENST00000409786 2117 ntBASIC21.85■■□□□ 1.09
PRDM9Q9NQV7 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PRDM9Q9NQV7 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
PRDM9Q9NQV7 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PRDM9Q9NQV7 AF131216.4-201ENST00000638924 1588 ntBASIC21.84■■□□□ 1.09
PRDM9Q9NQV7 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PRDM9Q9NQV7 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PRDM9Q9NQV7 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
PRDM9Q9NQV7 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PRDM9Q9NQV7 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PRDM9Q9NQV7 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
PRDM9Q9NQV7 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PRDM9Q9NQV7 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PRDM9Q9NQV7 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
PRDM9Q9NQV7 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
PRDM9Q9NQV7 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PRDM9Q9NQV7 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PRDM9Q9NQV7 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.83■■□□□ 1.09
PRDM9Q9NQV7 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.83■■□□□ 1.09
PRDM9Q9NQV7 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.83■■□□□ 1.09
PRDM9Q9NQV7 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PRDM9Q9NQV7 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.83■■□□□ 1.08
PRDM9Q9NQV7 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
PRDM9Q9NQV7 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
PRDM9Q9NQV7 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PRDM9Q9NQV7 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.82■■□□□ 1.08
PRDM9Q9NQV7 MIR4787-201ENST00000607364 84 ntBASIC21.82■■□□□ 1.08
PRDM9Q9NQV7 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PRDM9Q9NQV7 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PRDM9Q9NQV7 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PRDM9Q9NQV7 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.82■■□□□ 1.08
PRDM9Q9NQV7 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PRDM9Q9NQV7 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PRDM9Q9NQV7 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PRDM9Q9NQV7 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PRDM9Q9NQV7 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.81■■□□□ 1.08
PRDM9Q9NQV7 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PRDM9Q9NQV7 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PRDM9Q9NQV7 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
PRDM9Q9NQV7 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PRDM9Q9NQV7 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PRDM9Q9NQV7 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.8■■□□□ 1.08
PRDM9Q9NQV7 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PRDM9Q9NQV7 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
PRDM9Q9NQV7 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.8■■□□□ 1.08
PRDM9Q9NQV7 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.8■■□□□ 1.08
PRDM9Q9NQV7 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PRDM9Q9NQV7 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PRDM9Q9NQV7 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
PRDM9Q9NQV7 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.8■■□□□ 1.08
PRDM9Q9NQV7 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.79■■□□□ 1.08
PRDM9Q9NQV7 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.79■■□□□ 1.08
PRDM9Q9NQV7 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PRDM9Q9NQV7 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PRDM9Q9NQV7 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PRDM9Q9NQV7 GUSBP5-201ENST00000418136 578 ntBASIC21.79■■□□□ 1.08
PRDM9Q9NQV7 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
PRDM9Q9NQV7 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PRDM9Q9NQV7 AC093323.1-202ENST00000635031 2045 ntBASIC21.79■■□□□ 1.08
PRDM9Q9NQV7 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PRDM9Q9NQV7 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PRDM9Q9NQV7 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
PRDM9Q9NQV7 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PRDM9Q9NQV7 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.78■■□□□ 1.08
PRDM9Q9NQV7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.78■■□□□ 1.08
PRDM9Q9NQV7 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.78■■□□□ 1.08
PRDM9Q9NQV7 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PRDM9Q9NQV7 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PRDM9Q9NQV7 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PRDM9Q9NQV7 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.77■■□□□ 1.08
PRDM9Q9NQV7 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.77■■□□□ 1.08
PRDM9Q9NQV7 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.77■■□□□ 1.08
PRDM9Q9NQV7 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.77■■□□□ 1.08
PRDM9Q9NQV7 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PRDM9Q9NQV7 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRDM9Q9NQV7 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRDM9Q9NQV7 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.76■■□□□ 1.07
PRDM9Q9NQV7 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRDM9Q9NQV7 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PRDM9Q9NQV7 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRDM9Q9NQV7 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.76■■□□□ 1.07
PRDM9Q9NQV7 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRDM9Q9NQV7 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PRDM9Q9NQV7 AL022069.1-201ENST00000568025 1636 ntBASIC21.76■■□□□ 1.07
PRDM9Q9NQV7 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.75■■□□□ 1.07
PRDM9Q9NQV7 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRDM9Q9NQV7 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
PRDM9Q9NQV7 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
PRDM9Q9NQV7 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRDM9Q9NQV7 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.75■■□□□ 1.07
PRDM9Q9NQV7 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.75■■□□□ 1.07
PRDM9Q9NQV7 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRDM9Q9NQV7 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.75■■□□□ 1.07
PRDM9Q9NQV7 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PRDM9Q9NQV7 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRDM9Q9NQV7 AC092028.1-203ENST00000608262 953 ntBASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms