Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
ABCA6Q8N139 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC34.87■■■■□ 3.17
ABCA6Q8N139 AC131274.2-201ENST00000580697 1507 ntBASIC34.87■■■■□ 3.17
ABCA6Q8N139 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC34.87■■■■□ 3.17
ABCA6Q8N139 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC34.87■■■■□ 3.17
ABCA6Q8N139 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC34.87■■■■□ 3.17
ABCA6Q8N139 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
ABCA6Q8N139 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
ABCA6Q8N139 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC34.86■■■■□ 3.17
ABCA6Q8N139 AC099791.2-201ENST00000605725 427 ntBASIC34.86■■■■□ 3.17
ABCA6Q8N139 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
ABCA6Q8N139 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
ABCA6Q8N139 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC34.86■■■■□ 3.17
ABCA6Q8N139 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC34.85■■■■□ 3.17
ABCA6Q8N139 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC34.85■■■■□ 3.17
ABCA6Q8N139 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC34.85■■■■□ 3.17
ABCA6Q8N139 KRT18P5-201ENST00000436075 1291 ntBASIC34.85■■■■□ 3.17
ABCA6Q8N139 AC008764.7-201ENST00000593779 1081 ntBASIC34.85■■■■□ 3.17
ABCA6Q8N139 AL138724.1-201ENST00000606771 1088 ntBASIC34.85■■■■□ 3.17
ABCA6Q8N139 AC092171.4-201ENST00000609130 632 ntBASIC34.85■■■■□ 3.17
ABCA6Q8N139 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC34.85■■■■□ 3.17
ABCA6Q8N139 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
ABCA6Q8N139 SP2-202ENST00000613139 908 ntTSL 5 BASIC34.84■■■■□ 3.17
ABCA6Q8N139 AC092437.1-201ENST00000624794 1048 ntBASIC34.84■■■■□ 3.17
ABCA6Q8N139 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
ABCA6Q8N139 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
ABCA6Q8N139 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC34.84■■■■□ 3.17
ABCA6Q8N139 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC34.84■■■■□ 3.17
ABCA6Q8N139 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC34.84■■■■□ 3.17
ABCA6Q8N139 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC34.84■■■■□ 3.17
ABCA6Q8N139 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC34.84■■■■□ 3.17
ABCA6Q8N139 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC34.83■■■■□ 3.17
ABCA6Q8N139 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
ABCA6Q8N139 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC34.83■■■■□ 3.17
ABCA6Q8N139 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
ABCA6Q8N139 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC34.83■■■■□ 3.17
ABCA6Q8N139 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC34.83■■■■□ 3.17
ABCA6Q8N139 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC34.83■■■■□ 3.17
ABCA6Q8N139 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC34.83■■■■□ 3.17
ABCA6Q8N139 AC136469.2-201ENST00000623944 1028 ntBASIC34.83■■■■□ 3.17
ABCA6Q8N139 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC34.83■■■■□ 3.17
ABCA6Q8N139 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC34.83■■■■□ 3.17
ABCA6Q8N139 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC34.82■■■■□ 3.17
ABCA6Q8N139 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
ABCA6Q8N139 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC34.82■■■■□ 3.16
ABCA6Q8N139 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC34.82■■■■□ 3.16
ABCA6Q8N139 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC34.82■■■■□ 3.16
ABCA6Q8N139 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
ABCA6Q8N139 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
ABCA6Q8N139 ASB1-202ENST00000409297 878 ntTSL 5 BASIC34.81■■■■□ 3.16
ABCA6Q8N139 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC34.81■■■■□ 3.16
ABCA6Q8N139 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC34.81■■■■□ 3.16
ABCA6Q8N139 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC34.81■■■■□ 3.16
ABCA6Q8N139 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
ABCA6Q8N139 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC34.81■■■■□ 3.16
ABCA6Q8N139 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC34.81■■■■□ 3.16
ABCA6Q8N139 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC34.81■■■■□ 3.16
ABCA6Q8N139 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC34.8■■■■□ 3.16
ABCA6Q8N139 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC34.8■■■■□ 3.16
ABCA6Q8N139 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC34.79■■■■□ 3.16
ABCA6Q8N139 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC34.79■■■■□ 3.16
ABCA6Q8N139 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC34.79■■■■□ 3.16
ABCA6Q8N139 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC34.79■■■■□ 3.16
ABCA6Q8N139 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
ABCA6Q8N139 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC34.79■■■■□ 3.16
ABCA6Q8N139 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC34.78■■■■□ 3.16
ABCA6Q8N139 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC34.78■■■■□ 3.16
ABCA6Q8N139 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC34.78■■■■□ 3.16
ABCA6Q8N139 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC34.78■■■■□ 3.16
ABCA6Q8N139 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC34.77■■■■□ 3.16
ABCA6Q8N139 AC034268.1-201ENST00000441047 882 ntBASIC34.77■■■■□ 3.16
ABCA6Q8N139 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC34.77■■■■□ 3.16
ABCA6Q8N139 C17orf82-201ENST00000623772 1530 ntBASIC34.77■■■■□ 3.16
ABCA6Q8N139 AC006455.2-201ENST00000429931 906 ntBASIC34.77■■■■□ 3.16
ABCA6Q8N139 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.16
ABCA6Q8N139 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC34.76■■■■□ 3.15
ABCA6Q8N139 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC34.76■■■■□ 3.15
ABCA6Q8N139 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC34.76■■■■□ 3.15
ABCA6Q8N139 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC34.76■■■■□ 3.15
ABCA6Q8N139 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC34.76■■■■□ 3.15
ABCA6Q8N139 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC34.76■■■■□ 3.15
ABCA6Q8N139 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC34.76■■■■□ 3.15
ABCA6Q8N139 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC34.76■■■■□ 3.15
ABCA6Q8N139 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
ABCA6Q8N139 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC34.75■■■■□ 3.15
ABCA6Q8N139 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC34.75■■■■□ 3.15
ABCA6Q8N139 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC34.75■■■■□ 3.15
ABCA6Q8N139 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC34.74■■■■□ 3.15
ABCA6Q8N139 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
ABCA6Q8N139 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC34.74■■■■□ 3.15
ABCA6Q8N139 AC097639.1-201ENST00000565519 1891 ntBASIC34.74■■■■□ 3.15
ABCA6Q8N139 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC34.73■■■■□ 3.15
ABCA6Q8N139 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC34.73■■■■□ 3.15
ABCA6Q8N139 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC34.73■■■■□ 3.15
ABCA6Q8N139 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC34.73■■■■□ 3.15
ABCA6Q8N139 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC34.73■■■■□ 3.15
ABCA6Q8N139 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC34.72■■■■□ 3.15
ABCA6Q8N139 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC34.72■■■■□ 3.15
ABCA6Q8N139 SNX3-202ENST00000349379 890 ntTSL 2 BASIC34.72■■■■□ 3.15
ABCA6Q8N139 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC34.71■■■■□ 3.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms