Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC13.04□□□□□ -0.32
UBR4Q5T4S7 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
UBR4Q5T4S7 CCDC92B-201ENST00000575506 885 ntBASIC13.04□□□□□ -0.32
UBR4Q5T4S7 AC011298.3-201ENST00000615796 283 ntBASIC13.04□□□□□ -0.32
UBR4Q5T4S7 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
UBR4Q5T4S7 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
UBR4Q5T4S7 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC13.04□□□□□ -0.32
UBR4Q5T4S7 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
UBR4Q5T4S7 AC136469.2-201ENST00000623944 1028 ntBASIC13.04□□□□□ -0.32
UBR4Q5T4S7 PTCHD3P2-201ENST00000424937 1205 ntBASIC13.04□□□□□ -0.32
UBR4Q5T4S7 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC13.04□□□□□ -0.32
UBR4Q5T4S7 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
UBR4Q5T4S7 AC005703.6-201ENST00000623265 1329 ntBASIC13.03□□□□□ -0.32
UBR4Q5T4S7 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
UBR4Q5T4S7 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
UBR4Q5T4S7 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC13.03□□□□□ -0.32
UBR4Q5T4S7 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
UBR4Q5T4S7 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC13.03□□□□□ -0.32
UBR4Q5T4S7 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
UBR4Q5T4S7 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC13.03□□□□□ -0.32
UBR4Q5T4S7 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC13.03□□□□□ -0.32
UBR4Q5T4S7 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC13.03□□□□□ -0.32
UBR4Q5T4S7 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
UBR4Q5T4S7 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC13.02□□□□□ -0.32
UBR4Q5T4S7 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
UBR4Q5T4S7 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC13.02□□□□□ -0.33
UBR4Q5T4S7 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
UBR4Q5T4S7 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC13.02□□□□□ -0.33
UBR4Q5T4S7 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
UBR4Q5T4S7 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
UBR4Q5T4S7 AL138724.1-201ENST00000606771 1088 ntBASIC13.02□□□□□ -0.33
UBR4Q5T4S7 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
UBR4Q5T4S7 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC13.02□□□□□ -0.33
UBR4Q5T4S7 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
UBR4Q5T4S7 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
UBR4Q5T4S7 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC13.01□□□□□ -0.33
UBR4Q5T4S7 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBR4Q5T4S7 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC13.01□□□□□ -0.33
UBR4Q5T4S7 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
UBR4Q5T4S7 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC13.01□□□□□ -0.33
UBR4Q5T4S7 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBR4Q5T4S7 RHEB-204ENST00000472642 900 ntTSL 3 BASIC13.01□□□□□ -0.33
UBR4Q5T4S7 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBR4Q5T4S7 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
UBR4Q5T4S7 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC13.01□□□□□ -0.33
UBR4Q5T4S7 KRT18P29-201ENST00000397031 1267 ntBASIC13.01□□□□□ -0.33
UBR4Q5T4S7 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
UBR4Q5T4S7 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC13.01□□□□□ -0.33
UBR4Q5T4S7 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC13.01□□□□□ -0.33
UBR4Q5T4S7 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC13□□□□□ -0.33
UBR4Q5T4S7 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
UBR4Q5T4S7 NME4-202ENST00000382940 766 ntTSL 3 BASIC13□□□□□ -0.33
UBR4Q5T4S7 NME4-211ENST00000620944 1193 ntTSL 2 BASIC13□□□□□ -0.33
UBR4Q5T4S7 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
UBR4Q5T4S7 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC13□□□□□ -0.33
UBR4Q5T4S7 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
UBR4Q5T4S7 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC13□□□□□ -0.33
UBR4Q5T4S7 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC13□□□□□ -0.33
UBR4Q5T4S7 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC13□□□□□ -0.33
UBR4Q5T4S7 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
UBR4Q5T4S7 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBR4Q5T4S7 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC12.99□□□□□ -0.33
UBR4Q5T4S7 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
UBR4Q5T4S7 FAM201B-201ENST00000458407 597 ntBASIC12.99□□□□□ -0.33
UBR4Q5T4S7 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
UBR4Q5T4S7 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBR4Q5T4S7 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBR4Q5T4S7 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC12.99□□□□□ -0.33
UBR4Q5T4S7 SNX5-217ENST00000606557 1087 ntBASIC12.99□□□□□ -0.33
UBR4Q5T4S7 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC12.99□□□□□ -0.33
UBR4Q5T4S7 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBR4Q5T4S7 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
UBR4Q5T4S7 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
UBR4Q5T4S7 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBR4Q5T4S7 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC12.99□□□□□ -0.33
UBR4Q5T4S7 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBR4Q5T4S7 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBR4Q5T4S7 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC12.99□□□□□ -0.33
UBR4Q5T4S7 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC12.98□□□□□ -0.33
UBR4Q5T4S7 STX7-201ENST00000367937 1090 ntTSL 5 BASIC12.98□□□□□ -0.33
UBR4Q5T4S7 GPX1P1-201ENST00000388829 606 ntBASIC12.98□□□□□ -0.33
UBR4Q5T4S7 GRAMD4P2-201ENST00000423297 1097 ntBASIC12.98□□□□□ -0.33
UBR4Q5T4S7 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC12.98□□□□□ -0.33
UBR4Q5T4S7 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBR4Q5T4S7 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC12.98□□□□□ -0.33
UBR4Q5T4S7 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC12.98□□□□□ -0.33
UBR4Q5T4S7 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC12.98□□□□□ -0.33
UBR4Q5T4S7 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UBR4Q5T4S7 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UBR4Q5T4S7 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBR4Q5T4S7 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC12.98□□□□□ -0.33
UBR4Q5T4S7 AC245100.8-202ENST00000629247 1058 ntBASIC12.98□□□□□ -0.33
UBR4Q5T4S7 AC069152.1-201ENST00000438030 544 ntBASIC12.97□□□□□ -0.33
UBR4Q5T4S7 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC12.97□□□□□ -0.33
UBR4Q5T4S7 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
UBR4Q5T4S7 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UBR4Q5T4S7 AC016769.1-201ENST00000409132 1010 ntBASIC12.97□□□□□ -0.33
UBR4Q5T4S7 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC12.97□□□□□ -0.33
UBR4Q5T4S7 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UBR4Q5T4S7 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms