Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC22.19■■□□□ 1.14
CCNYL3P0C7X3 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC22.19■■□□□ 1.14
CCNYL3P0C7X3 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC22.19■■□□□ 1.14
CCNYL3P0C7X3 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCNYL3P0C7X3 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CCNYL3P0C7X3 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCNYL3P0C7X3 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC22.18■■□□□ 1.14
CCNYL3P0C7X3 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC22.18■■□□□ 1.14
CCNYL3P0C7X3 CLTA-210ENST00000540080 989 ntTSL 2 BASIC22.18■■□□□ 1.14
CCNYL3P0C7X3 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC22.18■■□□□ 1.14
CCNYL3P0C7X3 AL117332.1-201ENST00000622628 974 ntBASIC22.18■■□□□ 1.14
CCNYL3P0C7X3 RALB-208ENST00000631312 311 ntTSL 5 BASIC22.18■■□□□ 1.14
CCNYL3P0C7X3 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCNYL3P0C7X3 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
CCNYL3P0C7X3 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC22.17■■□□□ 1.14
CCNYL3P0C7X3 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCNYL3P0C7X3 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC22.17■■□□□ 1.14
CCNYL3P0C7X3 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
CCNYL3P0C7X3 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCNYL3P0C7X3 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
CCNYL3P0C7X3 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.17■■□□□ 1.14
CCNYL3P0C7X3 AC096887.2-201ENST00000623443 1957 ntBASIC22.17■■□□□ 1.14
CCNYL3P0C7X3 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCNYL3P0C7X3 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCNYL3P0C7X3 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCNYL3P0C7X3 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
CCNYL3P0C7X3 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CCNYL3P0C7X3 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CCNYL3P0C7X3 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC22.16■■□□□ 1.14
CCNYL3P0C7X3 MIR3621-201ENST00000580529 85 ntBASIC22.16■■□□□ 1.14
CCNYL3P0C7X3 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.16■■□□□ 1.14
CCNYL3P0C7X3 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC22.16■■□□□ 1.14
CCNYL3P0C7X3 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CCNYL3P0C7X3 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC22.15■■□□□ 1.14
CCNYL3P0C7X3 AC097639.1-201ENST00000565519 1891 ntBASIC22.15■■□□□ 1.14
CCNYL3P0C7X3 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
CCNYL3P0C7X3 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CCNYL3P0C7X3 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC22.15■■□□□ 1.14
CCNYL3P0C7X3 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.15■■□□□ 1.14
CCNYL3P0C7X3 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC22.15■■□□□ 1.14
CCNYL3P0C7X3 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CCNYL3P0C7X3 LSM4-201ENST00000252816 986 ntTSL 2 BASIC22.15■■□□□ 1.14
CCNYL3P0C7X3 AL136116.3-201ENST00000402907 1138 ntBASIC22.15■■□□□ 1.14
CCNYL3P0C7X3 AC131281.2-201ENST00000520478 145 ntBASIC22.15■■□□□ 1.14
CCNYL3P0C7X3 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
CCNYL3P0C7X3 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CCNYL3P0C7X3 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CCNYL3P0C7X3 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CCNYL3P0C7X3 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CCNYL3P0C7X3 AC090877.2-201ENST00000558441 1738 ntBASIC22.14■■□□□ 1.14
CCNYL3P0C7X3 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
CCNYL3P0C7X3 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC22.14■■□□□ 1.14
CCNYL3P0C7X3 AF131216.4-201ENST00000638924 1588 ntBASIC22.14■■□□□ 1.13
CCNYL3P0C7X3 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CCNYL3P0C7X3 AK3-203ENST00000447596 705 ntTSL 2 BASIC22.14■■□□□ 1.13
CCNYL3P0C7X3 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC22.14■■□□□ 1.13
CCNYL3P0C7X3 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
CCNYL3P0C7X3 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CCNYL3P0C7X3 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CCNYL3P0C7X3 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CCNYL3P0C7X3 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
CCNYL3P0C7X3 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
CCNYL3P0C7X3 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CCNYL3P0C7X3 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC22.13■■□□□ 1.13
CCNYL3P0C7X3 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC22.13■■□□□ 1.13
CCNYL3P0C7X3 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC22.13■■□□□ 1.13
CCNYL3P0C7X3 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CCNYL3P0C7X3 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
CCNYL3P0C7X3 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
CCNYL3P0C7X3 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC22.13■■□□□ 1.13
CCNYL3P0C7X3 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CCNYL3P0C7X3 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CCNYL3P0C7X3 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC22.12■■□□□ 1.13
CCNYL3P0C7X3 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC22.12■■□□□ 1.13
CCNYL3P0C7X3 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CCNYL3P0C7X3 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CCNYL3P0C7X3 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.11■■□□□ 1.13
CCNYL3P0C7X3 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
CCNYL3P0C7X3 NALT1-201ENST00000429224 738 ntTSL 5 BASIC22.11■■□□□ 1.13
CCNYL3P0C7X3 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC22.11■■□□□ 1.13
CCNYL3P0C7X3 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CCNYL3P0C7X3 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC22.11■■□□□ 1.13
CCNYL3P0C7X3 AL139246.5-201ENST00000606645 996 ntBASIC22.11■■□□□ 1.13
CCNYL3P0C7X3 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
CCNYL3P0C7X3 AC142381.3-201ENST00000568208 1670 ntBASIC22.11■■□□□ 1.13
CCNYL3P0C7X3 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
CCNYL3P0C7X3 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC22.1■■□□□ 1.13
CCNYL3P0C7X3 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
CCNYL3P0C7X3 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC22.1■■□□□ 1.13
CCNYL3P0C7X3 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CCNYL3P0C7X3 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC22.1■■□□□ 1.13
CCNYL3P0C7X3 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CCNYL3P0C7X3 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CCNYL3P0C7X3 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC22.09■■□□□ 1.13
CCNYL3P0C7X3 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CCNYL3P0C7X3 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC22.09■■□□□ 1.13
CCNYL3P0C7X3 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CCNYL3P0C7X3 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.09■■□□□ 1.13
CCNYL3P0C7X3 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CCNYL3P0C7X3 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms