Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.41■□□□□ 0.7
HLA-AP01891 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
HLA-AP01891 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-AP01891 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-AP01891 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-AP01891 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-AP01891 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-AP01891 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-AP01891 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-AP01891 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
HLA-AP01891 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-AP01891 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-AP01891 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
HLA-AP01891 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-AP01891 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-AP01891 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-AP01891 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-AP01891 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
HLA-AP01891 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.39■□□□□ 0.7
HLA-AP01891 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
HLA-AP01891 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
HLA-AP01891 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-AP01891 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-AP01891 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-AP01891 MACF1-219ENST00000484793 834 ntTSL 2 BASIC19.39■□□□□ 0.69
HLA-AP01891 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-AP01891 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
HLA-AP01891 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-AP01891 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.39■□□□□ 0.69
HLA-AP01891 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.39■□□□□ 0.69
HLA-AP01891 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-AP01891 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-AP01891 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-AP01891 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
HLA-AP01891 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-AP01891 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
HLA-AP01891 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-AP01891 HLA-L-211ENST00000482052 1765 ntBASIC19.38■□□□□ 0.69
HLA-AP01891 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-AP01891 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-AP01891 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-AP01891 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-AP01891 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-AP01891 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-AP01891 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-AP01891 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
HLA-AP01891 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC19.36■□□□□ 0.69
HLA-AP01891 AC008813.1-201ENST00000536597 885 ntBASIC19.36■□□□□ 0.69
HLA-AP01891 AC148477.6-201ENST00000623746 465 ntBASIC19.36■□□□□ 0.69
HLA-AP01891 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
HLA-AP01891 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-AP01891 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-AP01891 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
HLA-AP01891 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
HLA-AP01891 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-AP01891 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-AP01891 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC19.35■□□□□ 0.69
HLA-AP01891 METRNL-202ENST00000570778 967 ntTSL 5 BASIC19.35■□□□□ 0.69
HLA-AP01891 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC19.35■□□□□ 0.69
HLA-AP01891 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-AP01891 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
HLA-AP01891 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-AP01891 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-AP01891 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-AP01891 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-AP01891 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-AP01891 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
HLA-AP01891 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-AP01891 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-AP01891 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.34■□□□□ 0.69
HLA-AP01891 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
HLA-AP01891 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-AP01891 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-AP01891 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-AP01891 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-AP01891 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-AP01891 HLA-V-202ENST00000446817 847 ntBASIC19.34■□□□□ 0.69
HLA-AP01891 RPS2-202ENST00000526522 924 ntTSL 2 BASIC19.34■□□□□ 0.69
HLA-AP01891 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-AP01891 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-AP01891 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-AP01891 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-AP01891 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.34■□□□□ 0.69
HLA-AP01891 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HLA-AP01891 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
HLA-AP01891 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
HLA-AP01891 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HLA-AP01891 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HLA-AP01891 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
HLA-AP01891 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HLA-AP01891 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HLA-AP01891 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
HLA-AP01891 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.33■□□□□ 0.68
HLA-AP01891 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HLA-AP01891 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HLA-AP01891 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HLA-AP01891 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-AP01891 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-AP01891 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-AP01891 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms