Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CTNSO60931 AL139125.2-201ENST00000623134 1869 ntBASIC21.7■■□□□ 1.06
CTNSO60931 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.7■■□□□ 1.06
CTNSO60931 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CTNSO60931 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CTNSO60931 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.69■■□□□ 1.06
CTNSO60931 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CTNSO60931 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CTNSO60931 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CTNSO60931 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
CTNSO60931 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.69■■□□□ 1.06
CTNSO60931 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.69■■□□□ 1.06
CTNSO60931 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.69■■□□□ 1.06
CTNSO60931 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CTNSO60931 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CTNSO60931 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CTNSO60931 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CTNSO60931 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CTNSO60931 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CTNSO60931 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.68■■□□□ 1.06
CTNSO60931 AL022069.1-201ENST00000568025 1636 ntBASIC21.68■■□□□ 1.06
CTNSO60931 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CTNSO60931 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.68■■□□□ 1.06
CTNSO60931 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CTNSO60931 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.68■■□□□ 1.06
CTNSO60931 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CTNSO60931 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
CTNSO60931 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.67■■□□□ 1.06
CTNSO60931 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CTNSO60931 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.67■■□□□ 1.06
CTNSO60931 AL161729.1-201ENST00000604104 1402 ntBASIC21.67■■□□□ 1.06
CTNSO60931 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.67■■□□□ 1.06
CTNSO60931 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.67■■□□□ 1.06
CTNSO60931 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.67■■□□□ 1.06
CTNSO60931 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CTNSO60931 AC092028.1-203ENST00000608262 953 ntBASIC21.67■■□□□ 1.06
CTNSO60931 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CTNSO60931 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CTNSO60931 AC131274.2-201ENST00000580697 1507 ntBASIC21.66■■□□□ 1.06
CTNSO60931 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CTNSO60931 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CTNSO60931 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.66■■□□□ 1.06
CTNSO60931 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.66■■□□□ 1.06
CTNSO60931 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CTNSO60931 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.66■■□□□ 1.06
CTNSO60931 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CTNSO60931 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.65■■□□□ 1.06
CTNSO60931 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.65■■□□□ 1.06
CTNSO60931 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CTNSO60931 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CTNSO60931 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CTNSO60931 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.65■■□□□ 1.06
CTNSO60931 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CTNSO60931 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
CTNSO60931 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CTNSO60931 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CTNSO60931 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.65■■□□□ 1.06
CTNSO60931 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CTNSO60931 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CTNSO60931 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CTNSO60931 AC141586.4-201ENST00000624558 1573 ntBASIC21.65■■□□□ 1.06
CTNSO60931 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.64■■□□□ 1.06
CTNSO60931 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.64■■□□□ 1.06
CTNSO60931 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.64■■□□□ 1.05
CTNSO60931 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CTNSO60931 AC004448.1-201ENST00000458332 883 ntBASIC21.64■■□□□ 1.05
CTNSO60931 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CTNSO60931 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
CTNSO60931 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
CTNSO60931 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CTNSO60931 LINC01124-201ENST00000409786 2117 ntBASIC21.64■■□□□ 1.05
CTNSO60931 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.63■■□□□ 1.05
CTNSO60931 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CTNSO60931 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTNSO60931 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.63■■□□□ 1.05
CTNSO60931 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTNSO60931 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.63■■□□□ 1.05
CTNSO60931 LINC00543-201ENST00000567234 1845 ntBASIC21.63■■□□□ 1.05
CTNSO60931 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.63■■□□□ 1.05
CTNSO60931 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
CTNSO60931 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTNSO60931 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTNSO60931 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.62■■□□□ 1.05
CTNSO60931 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CTNSO60931 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CTNSO60931 GUSBP5-201ENST00000418136 578 ntBASIC21.62■■□□□ 1.05
CTNSO60931 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
CTNSO60931 SNX5-217ENST00000606557 1087 ntBASIC21.62■■□□□ 1.05
CTNSO60931 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.62■■□□□ 1.05
CTNSO60931 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CTNSO60931 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTNSO60931 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CTNSO60931 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTNSO60931 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
CTNSO60931 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CTNSO60931 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.61■■□□□ 1.05
CTNSO60931 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTNSO60931 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTNSO60931 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CTNSO60931 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms