Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ZIC3O60481 AL356441.2-201ENST00000443009 864 ntBASIC20.92■□□□□ 0.94
ZIC3O60481 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.92■□□□□ 0.94
ZIC3O60481 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.92■□□□□ 0.94
ZIC3O60481 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZIC3O60481 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.92■□□□□ 0.94
ZIC3O60481 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
ZIC3O60481 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.92■□□□□ 0.94
ZIC3O60481 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZIC3O60481 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
ZIC3O60481 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ZIC3O60481 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZIC3O60481 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZIC3O60481 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
ZIC3O60481 AC131274.2-201ENST00000580697 1507 ntBASIC20.91■□□□□ 0.94
ZIC3O60481 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.91■□□□□ 0.94
ZIC3O60481 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.91■□□□□ 0.94
ZIC3O60481 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.91■□□□□ 0.94
ZIC3O60481 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZIC3O60481 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ZIC3O60481 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZIC3O60481 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZIC3O60481 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ZIC3O60481 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.9■□□□□ 0.94
ZIC3O60481 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZIC3O60481 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZIC3O60481 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.9■□□□□ 0.94
ZIC3O60481 AC004448.1-201ENST00000458332 883 ntBASIC20.9■□□□□ 0.94
ZIC3O60481 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
ZIC3O60481 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.9■□□□□ 0.94
ZIC3O60481 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZIC3O60481 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZIC3O60481 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.89■□□□□ 0.93
ZIC3O60481 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.89■□□□□ 0.93
ZIC3O60481 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.89■□□□□ 0.93
ZIC3O60481 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ZIC3O60481 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
ZIC3O60481 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
ZIC3O60481 AC135731.1-201ENST00000569415 2548 ntBASIC20.88■□□□□ 0.93
ZIC3O60481 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZIC3O60481 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.88■□□□□ 0.93
ZIC3O60481 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZIC3O60481 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZIC3O60481 KRT16P3-201ENST00000439127 1283 ntBASIC20.88■□□□□ 0.93
ZIC3O60481 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.88■□□□□ 0.93
ZIC3O60481 AC010997.5-201ENST00000609182 354 ntBASIC20.88■□□□□ 0.93
ZIC3O60481 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.88■□□□□ 0.93
ZIC3O60481 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZIC3O60481 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.87■□□□□ 0.93
ZIC3O60481 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZIC3O60481 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZIC3O60481 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.87■□□□□ 0.93
ZIC3O60481 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.87■□□□□ 0.93
ZIC3O60481 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ZIC3O60481 AL022069.1-201ENST00000568025 1636 ntBASIC20.86■□□□□ 0.93
ZIC3O60481 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.86■□□□□ 0.93
ZIC3O60481 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZIC3O60481 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
ZIC3O60481 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
ZIC3O60481 MTDHP2-201ENST00000601468 714 ntBASIC20.86■□□□□ 0.93
ZIC3O60481 MIR6722-201ENST00000617286 78 ntBASIC20.86■□□□□ 0.93
ZIC3O60481 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.86■□□□□ 0.93
ZIC3O60481 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZIC3O60481 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.86■□□□□ 0.93
ZIC3O60481 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
ZIC3O60481 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
ZIC3O60481 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
ZIC3O60481 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
ZIC3O60481 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.85■□□□□ 0.93
ZIC3O60481 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.85■□□□□ 0.93
ZIC3O60481 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZIC3O60481 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.85■□□□□ 0.93
ZIC3O60481 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.85■□□□□ 0.93
ZIC3O60481 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.85■□□□□ 0.93
ZIC3O60481 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ZIC3O60481 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZIC3O60481 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.85■□□□□ 0.93
ZIC3O60481 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZIC3O60481 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZIC3O60481 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZIC3O60481 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.85■□□□□ 0.93
ZIC3O60481 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZIC3O60481 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZIC3O60481 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
ZIC3O60481 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZIC3O60481 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ZIC3O60481 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.84■□□□□ 0.93
ZIC3O60481 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.84■□□□□ 0.93
ZIC3O60481 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
ZIC3O60481 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZIC3O60481 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.84■□□□□ 0.93
ZIC3O60481 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ZIC3O60481 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ZIC3O60481 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ZIC3O60481 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ZIC3O60481 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ZIC3O60481 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.83■□□□□ 0.93
ZIC3O60481 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ZIC3O60481 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ZIC3O60481 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms