Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLDN4O14493 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.76■■□□□ 1.07
CLDN4O14493 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.76■■□□□ 1.07
CLDN4O14493 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CLDN4O14493 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLDN4O14493 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLDN4O14493 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CLDN4O14493 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CLDN4O14493 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLDN4O14493 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.75■■□□□ 1.07
CLDN4O14493 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CLDN4O14493 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLDN4O14493 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.75■■□□□ 1.07
CLDN4O14493 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLDN4O14493 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CLDN4O14493 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.74■■□□□ 1.07
CLDN4O14493 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.74■■□□□ 1.07
CLDN4O14493 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.74■■□□□ 1.07
CLDN4O14493 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CLDN4O14493 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.74■■□□□ 1.07
CLDN4O14493 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLDN4O14493 AL022069.1-201ENST00000568025 1636 ntBASIC21.73■■□□□ 1.07
CLDN4O14493 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.73■■□□□ 1.07
CLDN4O14493 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CLDN4O14493 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLDN4O14493 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLDN4O14493 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
CLDN4O14493 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLDN4O14493 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CLDN4O14493 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.73■■□□□ 1.07
CLDN4O14493 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLDN4O14493 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLDN4O14493 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLDN4O14493 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.72■■□□□ 1.07
CLDN4O14493 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CLDN4O14493 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLDN4O14493 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CLDN4O14493 AL161729.1-201ENST00000604104 1402 ntBASIC21.72■■□□□ 1.07
CLDN4O14493 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLDN4O14493 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CLDN4O14493 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
CLDN4O14493 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLDN4O14493 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CLDN4O14493 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CLDN4O14493 AC092028.1-203ENST00000608262 953 ntBASIC21.71■■□□□ 1.07
CLDN4O14493 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLDN4O14493 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CLDN4O14493 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.7■■□□□ 1.06
CLDN4O14493 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLDN4O14493 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLDN4O14493 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.69■■□□□ 1.06
CLDN4O14493 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.69■■□□□ 1.06
CLDN4O14493 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.69■■□□□ 1.06
CLDN4O14493 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLDN4O14493 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.69■■□□□ 1.06
CLDN4O14493 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.69■■□□□ 1.06
CLDN4O14493 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.69■■□□□ 1.06
CLDN4O14493 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLDN4O14493 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.68■■□□□ 1.06
CLDN4O14493 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.68■■□□□ 1.06
CLDN4O14493 GUSBP5-201ENST00000418136 578 ntBASIC21.68■■□□□ 1.06
CLDN4O14493 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.68■■□□□ 1.06
CLDN4O14493 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
CLDN4O14493 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.68■■□□□ 1.06
CLDN4O14493 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.68■■□□□ 1.06
CLDN4O14493 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CLDN4O14493 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.68■■□□□ 1.06
CLDN4O14493 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLDN4O14493 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.68■■□□□ 1.06
CLDN4O14493 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.67■■□□□ 1.06
CLDN4O14493 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.67■■□□□ 1.06
CLDN4O14493 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLDN4O14493 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLDN4O14493 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLDN4O14493 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.67■■□□□ 1.06
CLDN4O14493 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.67■■□□□ 1.06
CLDN4O14493 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CLDN4O14493 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CLDN4O14493 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.67■■□□□ 1.06
CLDN4O14493 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLDN4O14493 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.67■■□□□ 1.06
CLDN4O14493 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CLDN4O14493 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.66■■□□□ 1.06
CLDN4O14493 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLDN4O14493 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLDN4O14493 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLDN4O14493 AC004448.1-201ENST00000458332 883 ntBASIC21.66■■□□□ 1.06
CLDN4O14493 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
CLDN4O14493 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLDN4O14493 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLDN4O14493 AC135731.1-201ENST00000569415 2548 ntBASIC21.66■■□□□ 1.06
CLDN4O14493 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLDN4O14493 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLDN4O14493 AC131274.2-201ENST00000580697 1507 ntBASIC21.65■■□□□ 1.06
CLDN4O14493 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLDN4O14493 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.65■■□□□ 1.06
CLDN4O14493 AL139125.2-201ENST00000623134 1869 ntBASIC21.65■■□□□ 1.06
CLDN4O14493 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.65■■□□□ 1.06
CLDN4O14493 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLDN4O14493 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms