Protein–RNA interactions for Protein: A2RU48

SMCO3, Single-pass membrane and coiled-coil domain-containing protein 3, humanhuman

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3A2RU48 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SMCO3A2RU48 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
SMCO3A2RU48 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SMCO3A2RU48 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SMCO3A2RU48 DUSP8P5-201ENST00000422884 1815 ntBASIC18.65■□□□□ 0.58
SMCO3A2RU48 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SMCO3A2RU48 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SMCO3A2RU48 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMCO3A2RU48 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SMCO3A2RU48 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMCO3A2RU48 AL024507.2-201ENST00000606070 2574 ntBASIC18.65■□□□□ 0.58
SMCO3A2RU48 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC18.65■□□□□ 0.58
SMCO3A2RU48 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SMCO3A2RU48 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMCO3A2RU48 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SMCO3A2RU48 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC18.64■□□□□ 0.57
SMCO3A2RU48 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SMCO3A2RU48 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMCO3A2RU48 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC18.64■□□□□ 0.57
SMCO3A2RU48 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC18.64■□□□□ 0.57
SMCO3A2RU48 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMCO3A2RU48 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC18.64■□□□□ 0.57
SMCO3A2RU48 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMCO3A2RU48 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC18.64■□□□□ 0.57
SMCO3A2RU48 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMCO3A2RU48 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMCO3A2RU48 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMCO3A2RU48 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SMCO3A2RU48 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMCO3A2RU48 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.63■□□□□ 0.57
SMCO3A2RU48 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SMCO3A2RU48 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SMCO3A2RU48 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
SMCO3A2RU48 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
SMCO3A2RU48 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMCO3A2RU48 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMCO3A2RU48 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC18.62■□□□□ 0.57
SMCO3A2RU48 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMCO3A2RU48 RPS2P35-201ENST00000443417 897 ntBASIC18.62■□□□□ 0.57
SMCO3A2RU48 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC18.62■□□□□ 0.57
SMCO3A2RU48 RNF166-209ENST00000567844 633 ntTSL 5 BASIC18.62■□□□□ 0.57
SMCO3A2RU48 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SMCO3A2RU48 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC18.62■□□□□ 0.57
SMCO3A2RU48 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC18.62■□□□□ 0.57
SMCO3A2RU48 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.62■□□□□ 0.57
SMCO3A2RU48 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SMCO3A2RU48 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMCO3A2RU48 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
SMCO3A2RU48 ABCB10P4-201ENST00000566803 2184 ntBASIC18.61■□□□□ 0.57
SMCO3A2RU48 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
SMCO3A2RU48 AC004812.2-201ENST00000611079 2094 ntBASIC18.61■□□□□ 0.57
SMCO3A2RU48 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC18.61■□□□□ 0.57
SMCO3A2RU48 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMCO3A2RU48 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.61■□□□□ 0.57
SMCO3A2RU48 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SMCO3A2RU48 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SMCO3A2RU48 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
SMCO3A2RU48 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC18.6■□□□□ 0.57
SMCO3A2RU48 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SMCO3A2RU48 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.6■□□□□ 0.57
SMCO3A2RU48 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMCO3A2RU48 AGPS-202ENST00000409888 815 ntTSL 4 BASIC18.6■□□□□ 0.57
SMCO3A2RU48 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC18.6■□□□□ 0.57
SMCO3A2RU48 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
SMCO3A2RU48 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC18.6■□□□□ 0.57
SMCO3A2RU48 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMCO3A2RU48 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMCO3A2RU48 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMCO3A2RU48 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SMCO3A2RU48 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.6■□□□□ 0.57
SMCO3A2RU48 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMCO3A2RU48 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMCO3A2RU48 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC18.59■□□□□ 0.57
SMCO3A2RU48 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMCO3A2RU48 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SMCO3A2RU48 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMCO3A2RU48 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMCO3A2RU48 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMCO3A2RU48 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SMCO3A2RU48 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMCO3A2RU48 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SMCO3A2RU48 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SMCO3A2RU48 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SMCO3A2RU48 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SMCO3A2RU48 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMCO3A2RU48 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC18.58■□□□□ 0.56
SMCO3A2RU48 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SMCO3A2RU48 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC18.58■□□□□ 0.56
SMCO3A2RU48 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMCO3A2RU48 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC18.58■□□□□ 0.56
SMCO3A2RU48 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.58■□□□□ 0.56
SMCO3A2RU48 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMCO3A2RU48 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMCO3A2RU48 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMCO3A2RU48 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SMCO3A2RU48 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMCO3A2RU48 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SMCO3A2RU48 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC18.57■□□□□ 0.56
SMCO3A2RU48 ZNRF2P2-203ENST00000454624 420 ntBASIC18.57■□□□□ 0.56
SMCO3A2RU48 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms