Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
FNDC3AQ9Y2H6 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
FNDC3AQ9Y2H6 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.62■■□□□ 1.37
FNDC3AQ9Y2H6 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC23.62■■□□□ 1.37
FNDC3AQ9Y2H6 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
FNDC3AQ9Y2H6 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
FNDC3AQ9Y2H6 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC23.62■■□□□ 1.37
FNDC3AQ9Y2H6 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC23.61■■□□□ 1.37
FNDC3AQ9Y2H6 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.61■■□□□ 1.37
FNDC3AQ9Y2H6 AC022211.4-201ENST00000625094 2161 ntBASIC23.61■■□□□ 1.37
FNDC3AQ9Y2H6 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
FNDC3AQ9Y2H6 FOXO3B-201ENST00000395675 1928 ntBASIC23.61■■□□□ 1.37
FNDC3AQ9Y2H6 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
FNDC3AQ9Y2H6 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
FNDC3AQ9Y2H6 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
FNDC3AQ9Y2H6 AC120024.1-201ENST00000562672 995 ntBASIC23.61■■□□□ 1.37
FNDC3AQ9Y2H6 AC137630.3-201ENST00000607245 391 ntBASIC23.61■■□□□ 1.37
FNDC3AQ9Y2H6 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
FNDC3AQ9Y2H6 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
FNDC3AQ9Y2H6 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
FNDC3AQ9Y2H6 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
FNDC3AQ9Y2H6 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC23.6■■□□□ 1.37
FNDC3AQ9Y2H6 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.6■■□□□ 1.37
FNDC3AQ9Y2H6 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
FNDC3AQ9Y2H6 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
FNDC3AQ9Y2H6 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
FNDC3AQ9Y2H6 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC23.59■■□□□ 1.37
FNDC3AQ9Y2H6 AC021242.3-201ENST00000607598 1377 ntBASIC23.59■■□□□ 1.37
FNDC3AQ9Y2H6 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
FNDC3AQ9Y2H6 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.59■■□□□ 1.37
FNDC3AQ9Y2H6 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.59■■□□□ 1.37
FNDC3AQ9Y2H6 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
FNDC3AQ9Y2H6 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
FNDC3AQ9Y2H6 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.58■■□□□ 1.37
FNDC3AQ9Y2H6 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
FNDC3AQ9Y2H6 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.57■■□□□ 1.36
FNDC3AQ9Y2H6 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
FNDC3AQ9Y2H6 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
FNDC3AQ9Y2H6 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
FNDC3AQ9Y2H6 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
FNDC3AQ9Y2H6 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.57■■□□□ 1.36
FNDC3AQ9Y2H6 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23.57■■□□□ 1.36
FNDC3AQ9Y2H6 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
FNDC3AQ9Y2H6 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC23.57■■□□□ 1.36
FNDC3AQ9Y2H6 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
FNDC3AQ9Y2H6 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
FNDC3AQ9Y2H6 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
FNDC3AQ9Y2H6 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.56■■□□□ 1.36
FNDC3AQ9Y2H6 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
FNDC3AQ9Y2H6 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC23.56■■□□□ 1.36
FNDC3AQ9Y2H6 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.56■■□□□ 1.36
FNDC3AQ9Y2H6 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
FNDC3AQ9Y2H6 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC23.55■■□□□ 1.36
FNDC3AQ9Y2H6 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
FNDC3AQ9Y2H6 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.55■■□□□ 1.36
FNDC3AQ9Y2H6 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
FNDC3AQ9Y2H6 MIR638-201ENST00000385237 100 ntBASIC23.55■■□□□ 1.36
FNDC3AQ9Y2H6 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
FNDC3AQ9Y2H6 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
FNDC3AQ9Y2H6 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23.55■■□□□ 1.36
FNDC3AQ9Y2H6 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.55■■□□□ 1.36
FNDC3AQ9Y2H6 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
FNDC3AQ9Y2H6 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
FNDC3AQ9Y2H6 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
FNDC3AQ9Y2H6 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
FNDC3AQ9Y2H6 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC23.54■■□□□ 1.36
FNDC3AQ9Y2H6 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
FNDC3AQ9Y2H6 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
FNDC3AQ9Y2H6 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
FNDC3AQ9Y2H6 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC23.54■■□□□ 1.36
FNDC3AQ9Y2H6 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
FNDC3AQ9Y2H6 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
FNDC3AQ9Y2H6 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
FNDC3AQ9Y2H6 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.54■■□□□ 1.36
FNDC3AQ9Y2H6 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23.54■■□□□ 1.36
FNDC3AQ9Y2H6 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
FNDC3AQ9Y2H6 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
FNDC3AQ9Y2H6 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
FNDC3AQ9Y2H6 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
FNDC3AQ9Y2H6 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23.53■■□□□ 1.36
FNDC3AQ9Y2H6 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC23.52■■□□□ 1.36
FNDC3AQ9Y2H6 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC23.52■■□□□ 1.36
FNDC3AQ9Y2H6 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC23.52■■□□□ 1.36
FNDC3AQ9Y2H6 AC092028.1-203ENST00000608262 953 ntBASIC23.52■■□□□ 1.36
FNDC3AQ9Y2H6 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
FNDC3AQ9Y2H6 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
FNDC3AQ9Y2H6 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.36
FNDC3AQ9Y2H6 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC23.51■■□□□ 1.35
FNDC3AQ9Y2H6 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
FNDC3AQ9Y2H6 AC138932.3-201ENST00000567634 1902 ntBASIC23.51■■□□□ 1.35
FNDC3AQ9Y2H6 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
FNDC3AQ9Y2H6 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
FNDC3AQ9Y2H6 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
FNDC3AQ9Y2H6 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.51■■□□□ 1.35
FNDC3AQ9Y2H6 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.51■■□□□ 1.35
FNDC3AQ9Y2H6 AC131281.2-201ENST00000520478 145 ntBASIC23.51■■□□□ 1.35
FNDC3AQ9Y2H6 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.51■■□□□ 1.35
FNDC3AQ9Y2H6 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
FNDC3AQ9Y2H6 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
FNDC3AQ9Y2H6 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms