Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AC136469.2-201ENST00000623944 1028 ntBASIC38.03■■■■□ 3.68
RIMBP3Q9UFD9 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC38.03■■■■□ 3.68
RIMBP3Q9UFD9 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC38.03■■■■□ 3.68
RIMBP3Q9UFD9 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC38.03■■■■□ 3.68
RIMBP3Q9UFD9 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC38.03■■■■□ 3.68
RIMBP3Q9UFD9 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC38.02■■■■□ 3.68
RIMBP3Q9UFD9 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC38.02■■■■□ 3.68
RIMBP3Q9UFD9 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC38.02■■■■□ 3.68
RIMBP3Q9UFD9 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC38.01■■■■□ 3.68
RIMBP3Q9UFD9 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC38.01■■■■□ 3.68
RIMBP3Q9UFD9 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC38.01■■■■□ 3.68
RIMBP3Q9UFD9 CCDC92B-201ENST00000575506 885 ntBASIC38.01■■■■□ 3.68
RIMBP3Q9UFD9 GRAMD4P2-201ENST00000423297 1097 ntBASIC38.01■■■■□ 3.67
RIMBP3Q9UFD9 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC38.01■■■■□ 3.67
RIMBP3Q9UFD9 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC38.01■■■■□ 3.67
RIMBP3Q9UFD9 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC38■■■■□ 3.67
RIMBP3Q9UFD9 AC233992.3-201ENST00000607491 485 ntBASIC38■■■■□ 3.67
RIMBP3Q9UFD9 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC37.99■■■■□ 3.67
RIMBP3Q9UFD9 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC37.99■■■■□ 3.67
RIMBP3Q9UFD9 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC37.99■■■■□ 3.67
RIMBP3Q9UFD9 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC37.99■■■■□ 3.67
RIMBP3Q9UFD9 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC37.99■■■■□ 3.67
RIMBP3Q9UFD9 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC37.99■■■■□ 3.67
RIMBP3Q9UFD9 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC37.99■■■■□ 3.67
RIMBP3Q9UFD9 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC37.98■■■■□ 3.67
RIMBP3Q9UFD9 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC37.98■■■■□ 3.67
RIMBP3Q9UFD9 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC37.98■■■■□ 3.67
RIMBP3Q9UFD9 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC37.98■■■■□ 3.67
RIMBP3Q9UFD9 AC245100.8-202ENST00000629247 1058 ntBASIC37.98■■■■□ 3.67
RIMBP3Q9UFD9 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC37.98■■■■□ 3.67
RIMBP3Q9UFD9 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC37.98■■■■□ 3.67
RIMBP3Q9UFD9 AC099791.2-201ENST00000605725 427 ntBASIC37.98■■■■□ 3.67
RIMBP3Q9UFD9 AC073111.5-205ENST00000641717 521 ntBASIC37.98■■■■□ 3.67
RIMBP3Q9UFD9 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC37.97■■■■□ 3.67
RIMBP3Q9UFD9 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC37.97■■■■□ 3.67
RIMBP3Q9UFD9 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC37.96■■■■□ 3.67
RIMBP3Q9UFD9 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC37.96■■■■□ 3.67
RIMBP3Q9UFD9 AC093827.2-201ENST00000512654 315 ntBASIC37.96■■■■□ 3.67
RIMBP3Q9UFD9 AC080038.1-201ENST00000611274 1154 ntBASIC37.96■■■■□ 3.67
RIMBP3Q9UFD9 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC37.95■■■■□ 3.67
RIMBP3Q9UFD9 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC37.95■■■■□ 3.67
RIMBP3Q9UFD9 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC37.95■■■■□ 3.67
RIMBP3Q9UFD9 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC37.94■■■■□ 3.66
RIMBP3Q9UFD9 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC37.94■■■■□ 3.66
RIMBP3Q9UFD9 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC37.94■■■■□ 3.66
RIMBP3Q9UFD9 BX842568.3-201ENST00000418104 571 ntBASIC37.94■■■■□ 3.66
RIMBP3Q9UFD9 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC37.94■■■■□ 3.66
RIMBP3Q9UFD9 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC37.94■■■■□ 3.66
RIMBP3Q9UFD9 ST7-AS1-201ENST00000456775 1889 ntBASIC37.93■■■■□ 3.66
RIMBP3Q9UFD9 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC37.93■■■■□ 3.66
RIMBP3Q9UFD9 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC37.93■■■■□ 3.66
RIMBP3Q9UFD9 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC37.93■■■■□ 3.66
RIMBP3Q9UFD9 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC37.93■■■■□ 3.66
RIMBP3Q9UFD9 CDCA4P2-201ENST00000441182 718 ntBASIC37.92■■■■□ 3.66
RIMBP3Q9UFD9 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC37.92■■■■□ 3.66
RIMBP3Q9UFD9 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC37.92■■■■□ 3.66
RIMBP3Q9UFD9 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC37.91■■■■□ 3.66
RIMBP3Q9UFD9 NME4-202ENST00000382940 766 ntTSL 3 BASIC37.9■■■■□ 3.66
RIMBP3Q9UFD9 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC37.9■■■■□ 3.66
RIMBP3Q9UFD9 KRT18P14-201ENST00000534205 1250 ntBASIC37.9■■■■□ 3.66
RIMBP3Q9UFD9 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC37.9■■■■□ 3.66
RIMBP3Q9UFD9 NME4-211ENST00000620944 1193 ntTSL 2 BASIC37.9■■■■□ 3.66
RIMBP3Q9UFD9 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC37.9■■■■□ 3.66
RIMBP3Q9UFD9 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC37.9■■■■□ 3.66
RIMBP3Q9UFD9 NTF6G-201ENST00000591094 616 ntBASIC37.9■■■■□ 3.66
RIMBP3Q9UFD9 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC37.89■■■■□ 3.66
RIMBP3Q9UFD9 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC37.89■■■■□ 3.66
RIMBP3Q9UFD9 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC37.89■■■■□ 3.66
RIMBP3Q9UFD9 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC37.89■■■■□ 3.66
RIMBP3Q9UFD9 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC37.89■■■■□ 3.66
RIMBP3Q9UFD9 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC37.89■■■■□ 3.66
RIMBP3Q9UFD9 AL499627.2-201ENST00000606283 725 ntBASIC37.89■■■■□ 3.66
RIMBP3Q9UFD9 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC37.89■■■■□ 3.66
RIMBP3Q9UFD9 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC37.88■■■■□ 3.66
RIMBP3Q9UFD9 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC37.88■■■■□ 3.65
RIMBP3Q9UFD9 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC37.87■■■■□ 3.65
RIMBP3Q9UFD9 SNX3-202ENST00000349379 890 ntTSL 2 BASIC37.87■■■■□ 3.65
RIMBP3Q9UFD9 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC37.87■■■■□ 3.65
RIMBP3Q9UFD9 TSPY20P-201ENST00000450910 630 ntBASIC37.87■■■■□ 3.65
RIMBP3Q9UFD9 PPP1R14BP3-201ENST00000509033 445 ntBASIC37.87■■■■□ 3.65
RIMBP3Q9UFD9 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC37.87■■■■□ 3.65
RIMBP3Q9UFD9 CD99P1-205ENST00000527459 561 ntBASIC37.87■■■■□ 3.65
RIMBP3Q9UFD9 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC37.87■■■■□ 3.65
RIMBP3Q9UFD9 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC37.87■■■■□ 3.65
RIMBP3Q9UFD9 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC37.87■■■■□ 3.65
RIMBP3Q9UFD9 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC37.86■■■■□ 3.65
RIMBP3Q9UFD9 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC37.86■■■■□ 3.65
RIMBP3Q9UFD9 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC37.86■■■■□ 3.65
RIMBP3Q9UFD9 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC37.86■■■■□ 3.65
RIMBP3Q9UFD9 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC37.85■■■■□ 3.65
RIMBP3Q9UFD9 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC37.85■■■■□ 3.65
RIMBP3Q9UFD9 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC37.85■■■■□ 3.65
RIMBP3Q9UFD9 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC37.85■■■■□ 3.65
RIMBP3Q9UFD9 MAP2K4P1-201ENST00000438453 1195 ntBASIC37.85■■■■□ 3.65
RIMBP3Q9UFD9 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC37.85■■■■□ 3.65
RIMBP3Q9UFD9 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC37.85■■■■□ 3.65
RIMBP3Q9UFD9 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC37.85■■■■□ 3.65
RIMBP3Q9UFD9 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC37.85■■■■□ 3.65
RIMBP3Q9UFD9 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC37.84■■■■□ 3.65
RIMBP3Q9UFD9 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC37.84■■■■□ 3.65
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms