Protein–RNA interactions for Protein: Q9H158

PCDHAC1, Protocadherin alpha-C1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC1Q9H158 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC22.08■■□□□ 1.13
PCDHAC1Q9H158 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
PCDHAC1Q9H158 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC22.08■■□□□ 1.13
PCDHAC1Q9H158 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
PCDHAC1Q9H158 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
PCDHAC1Q9H158 AL117328.2-201ENST00000624617 1940 ntBASIC22.08■■□□□ 1.12
PCDHAC1Q9H158 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHAC1Q9H158 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHAC1Q9H158 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHAC1Q9H158 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC22.07■■□□□ 1.12
PCDHAC1Q9H158 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC22.07■■□□□ 1.12
PCDHAC1Q9H158 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHAC1Q9H158 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHAC1Q9H158 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHAC1Q9H158 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHAC1Q9H158 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHAC1Q9H158 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC22.06■■□□□ 1.12
PCDHAC1Q9H158 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHAC1Q9H158 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHAC1Q9H158 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHAC1Q9H158 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC22.05■■□□□ 1.12
PCDHAC1Q9H158 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHAC1Q9H158 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC22.05■■□□□ 1.12
PCDHAC1Q9H158 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
PCDHAC1Q9H158 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHAC1Q9H158 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHAC1Q9H158 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHAC1Q9H158 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHAC1Q9H158 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC22.05■■□□□ 1.12
PCDHAC1Q9H158 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
PCDHAC1Q9H158 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHAC1Q9H158 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHAC1Q9H158 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHAC1Q9H158 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHAC1Q9H158 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC22.04■■□□□ 1.12
PCDHAC1Q9H158 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHAC1Q9H158 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHAC1Q9H158 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHAC1Q9H158 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
PCDHAC1Q9H158 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
PCDHAC1Q9H158 AL157400.5-201ENST00000507624 621 ntBASIC22.03■■□□□ 1.12
PCDHAC1Q9H158 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHAC1Q9H158 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHAC1Q9H158 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
PCDHAC1Q9H158 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHAC1Q9H158 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC22.02■■□□□ 1.12
PCDHAC1Q9H158 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHAC1Q9H158 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC22.02■■□□□ 1.12
PCDHAC1Q9H158 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC22.02■■□□□ 1.12
PCDHAC1Q9H158 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
PCDHAC1Q9H158 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHAC1Q9H158 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHAC1Q9H158 EP400NL-214ENST00000641289 2402 ntBASIC22.02■■□□□ 1.12
PCDHAC1Q9H158 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC22.02■■□□□ 1.12
PCDHAC1Q9H158 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHAC1Q9H158 STK25-234ENST00000535007 2459 ntTSL 2 BASIC22.02■■□□□ 1.12
PCDHAC1Q9H158 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
PCDHAC1Q9H158 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
PCDHAC1Q9H158 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHAC1Q9H158 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHAC1Q9H158 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHAC1Q9H158 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHAC1Q9H158 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC22.01■■□□□ 1.11
PCDHAC1Q9H158 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHAC1Q9H158 AC025884.2-201ENST00000553429 711 ntBASIC22.01■■□□□ 1.11
PCDHAC1Q9H158 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
PCDHAC1Q9H158 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
PCDHAC1Q9H158 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHAC1Q9H158 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
PCDHAC1Q9H158 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC22.01■■□□□ 1.11
PCDHAC1Q9H158 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC22■■□□□ 1.11
PCDHAC1Q9H158 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC22■■□□□ 1.11
PCDHAC1Q9H158 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHAC1Q9H158 PFN2-211ENST00000489155 636 ntTSL 4 BASIC22■■□□□ 1.11
PCDHAC1Q9H158 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHAC1Q9H158 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHAC1Q9H158 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHAC1Q9H158 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
PCDHAC1Q9H158 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHAC1Q9H158 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.99■■□□□ 1.11
PCDHAC1Q9H158 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.99■■□□□ 1.11
PCDHAC1Q9H158 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.99■■□□□ 1.11
PCDHAC1Q9H158 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHAC1Q9H158 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
PCDHAC1Q9H158 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHAC1Q9H158 AC233723.2-201ENST00000623798 2106 ntBASIC21.98■■□□□ 1.11
PCDHAC1Q9H158 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHAC1Q9H158 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.98■■□□□ 1.11
PCDHAC1Q9H158 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
PCDHAC1Q9H158 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHAC1Q9H158 AC060814.1-201ENST00000554326 538 ntBASIC21.98■■□□□ 1.11
PCDHAC1Q9H158 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.98■■□□□ 1.11
PCDHAC1Q9H158 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHAC1Q9H158 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHAC1Q9H158 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHAC1Q9H158 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
PCDHAC1Q9H158 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHAC1Q9H158 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHAC1Q9H158 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHAC1Q9H158 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms