Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF2Q99496 RARRES2P2-201ENST00000394842 485 ntBASIC18.33■□□□□ 0.52
RNF2Q99496 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF2Q99496 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF2Q99496 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF2Q99496 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RNF2Q99496 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC18.33■□□□□ 0.52
RNF2Q99496 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF2Q99496 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RNF2Q99496 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF2Q99496 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF2Q99496 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF2Q99496 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC18.32■□□□□ 0.52
RNF2Q99496 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RNF2Q99496 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF2Q99496 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF2Q99496 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF2Q99496 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
RNF2Q99496 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF2Q99496 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF2Q99496 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RNF2Q99496 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RNF2Q99496 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF2Q99496 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF2Q99496 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RNF2Q99496 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF2Q99496 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
RNF2Q99496 MIR6089-201ENST00000616698 64 ntBASIC18.31■□□□□ 0.52
RNF2Q99496 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
RNF2Q99496 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RNF2Q99496 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF2Q99496 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF2Q99496 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.31■□□□□ 0.52
RNF2Q99496 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC18.3■□□□□ 0.52
RNF2Q99496 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
RNF2Q99496 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
RNF2Q99496 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF2Q99496 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF2Q99496 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF2Q99496 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RNF2Q99496 GFER-205ENST00000569451 517 ntTSL 5 BASIC18.3■□□□□ 0.52
RNF2Q99496 BRD4-212ENST00000630599 726 ntTSL 2 BASIC18.3■□□□□ 0.52
RNF2Q99496 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF2Q99496 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RNF2Q99496 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC18.3■□□□□ 0.52
RNF2Q99496 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
RNF2Q99496 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.3■□□□□ 0.52
RNF2Q99496 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.3■□□□□ 0.52
RNF2Q99496 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF2Q99496 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RNF2Q99496 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC18.29■□□□□ 0.52
RNF2Q99496 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF2Q99496 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF2Q99496 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF2Q99496 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF2Q99496 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC18.29■□□□□ 0.52
RNF2Q99496 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RNF2Q99496 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC18.29■□□□□ 0.52
RNF2Q99496 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF2Q99496 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC18.28■□□□□ 0.52
RNF2Q99496 AC026202.3-201ENST00000600805 1127 ntBASIC18.28■□□□□ 0.52
RNF2Q99496 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
RNF2Q99496 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.28■□□□□ 0.52
RNF2Q99496 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
RNF2Q99496 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC18.27■□□□□ 0.52
RNF2Q99496 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RNF2Q99496 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF2Q99496 CASK-201ENST00000378154 2494 ntTSL 5 BASIC18.26■□□□□ 0.51
RNF2Q99496 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF2Q99496 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF2Q99496 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF2Q99496 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RNF2Q99496 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF2Q99496 RAP2CP1-202ENST00000605179 643 ntBASIC18.26■□□□□ 0.51
RNF2Q99496 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF2Q99496 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF2Q99496 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF2Q99496 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RNF2Q99496 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RNF2Q99496 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF2Q99496 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF2Q99496 HYI-213ENST00000583037 1322 ntTSL 5 BASIC18.25■□□□□ 0.51
RNF2Q99496 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF2Q99496 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF2Q99496 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF2Q99496 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF2Q99496 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF2Q99496 AC133552.2-201ENST00000619106 1032 ntBASIC18.25■□□□□ 0.51
RNF2Q99496 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RNF2Q99496 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RNF2Q99496 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF2Q99496 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.25■□□□□ 0.51
RNF2Q99496 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
RNF2Q99496 AC009831.1-201ENST00000580420 1582 ntBASIC18.25■□□□□ 0.51
RNF2Q99496 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18.25■□□□□ 0.51
RNF2Q99496 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF2Q99496 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF2Q99496 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RNF2Q99496 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF2Q99496 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms