Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC25.75■■□□□ 1.71
COL1A2P08123 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC25.75■■□□□ 1.71
COL1A2P08123 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC25.75■■□□□ 1.71
COL1A2P08123 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC25.74■■□□□ 1.71
COL1A2P08123 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC25.74■■□□□ 1.71
COL1A2P08123 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
COL1A2P08123 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
COL1A2P08123 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC25.74■■□□□ 1.71
COL1A2P08123 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
COL1A2P08123 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
COL1A2P08123 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
COL1A2P08123 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC25.73■■□□□ 1.71
COL1A2P08123 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC25.73■■□□□ 1.71
COL1A2P08123 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC25.73■■□□□ 1.71
COL1A2P08123 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC25.72■■□□□ 1.71
COL1A2P08123 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC25.72■■□□□ 1.71
COL1A2P08123 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC25.72■■□□□ 1.71
COL1A2P08123 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC25.72■■□□□ 1.71
COL1A2P08123 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC25.71■■□□□ 1.71
COL1A2P08123 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC25.71■■□□□ 1.71
COL1A2P08123 AL512631.2-201ENST00000604634 923 ntBASIC25.71■■□□□ 1.71
COL1A2P08123 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
COL1A2P08123 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC25.71■■□□□ 1.71
COL1A2P08123 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
COL1A2P08123 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
COL1A2P08123 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC25.7■■□□□ 1.71
COL1A2P08123 AL136116.3-201ENST00000402907 1138 ntBASIC25.7■■□□□ 1.71
COL1A2P08123 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC25.7■■□□□ 1.71
COL1A2P08123 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC25.7■■□□□ 1.71
COL1A2P08123 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC25.7■■□□□ 1.71
COL1A2P08123 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
COL1A2P08123 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC25.7■■□□□ 1.71
COL1A2P08123 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC25.69■■□□□ 1.7
COL1A2P08123 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
COL1A2P08123 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
COL1A2P08123 QDPR-206ENST00000508623 601 ntTSL 3 BASIC25.69■■□□□ 1.7
COL1A2P08123 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC25.69■■□□□ 1.7
COL1A2P08123 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
COL1A2P08123 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC25.69■■□□□ 1.7
COL1A2P08123 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
COL1A2P08123 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
COL1A2P08123 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
COL1A2P08123 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
COL1A2P08123 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
COL1A2P08123 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
COL1A2P08123 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.69■■□□□ 1.7
COL1A2P08123 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
COL1A2P08123 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC25.69■■□□□ 1.7
COL1A2P08123 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
COL1A2P08123 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
COL1A2P08123 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
COL1A2P08123 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
COL1A2P08123 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC25.68■■□□□ 1.7
COL1A2P08123 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
COL1A2P08123 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC25.68■■□□□ 1.7
COL1A2P08123 MIR4466-201ENST00000606121 54 ntBASIC25.68■■□□□ 1.7
COL1A2P08123 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
COL1A2P08123 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC25.67■■□□□ 1.7
COL1A2P08123 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
COL1A2P08123 AC131274.2-201ENST00000580697 1507 ntBASIC25.67■■□□□ 1.7
COL1A2P08123 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC25.67■■□□□ 1.7
COL1A2P08123 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC25.67■■□□□ 1.7
COL1A2P08123 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC25.67■■□□□ 1.7
COL1A2P08123 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
COL1A2P08123 LSR-205ENST00000427250 1606 ntTSL 2 BASIC25.66■■□□□ 1.7
COL1A2P08123 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
COL1A2P08123 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
COL1A2P08123 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
COL1A2P08123 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
COL1A2P08123 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
COL1A2P08123 STK32C-205ENST00000456004 607 ntTSL 2 BASIC25.66■■□□□ 1.7
COL1A2P08123 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC25.66■■□□□ 1.7
COL1A2P08123 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
COL1A2P08123 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
COL1A2P08123 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
COL1A2P08123 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
COL1A2P08123 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
COL1A2P08123 AC019069.1-201ENST00000610008 1333 ntBASIC25.65■■□□□ 1.7
COL1A2P08123 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC25.65■■□□□ 1.7
COL1A2P08123 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
COL1A2P08123 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
COL1A2P08123 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
COL1A2P08123 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
COL1A2P08123 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
COL1A2P08123 RASSF1-AS1-201ENST00000629828 790 ntBASIC25.65■■□□□ 1.7
COL1A2P08123 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
COL1A2P08123 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
COL1A2P08123 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC25.64■■□□□ 1.7
COL1A2P08123 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
COL1A2P08123 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
COL1A2P08123 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC25.64■■□□□ 1.69
COL1A2P08123 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
COL1A2P08123 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
COL1A2P08123 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC25.64■■□□□ 1.69
COL1A2P08123 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
COL1A2P08123 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
COL1A2P08123 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
COL1A2P08123 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
COL1A2P08123 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
COL1A2P08123 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 234 ms