Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC10.6□□□□□ -0.71
USH2AO75445 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
USH2AO75445 AC004448.1-201ENST00000458332 883 ntBASIC10.6□□□□□ -0.71
USH2AO75445 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
USH2AO75445 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC10.59□□□□□ -0.71
USH2AO75445 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
USH2AO75445 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC10.59□□□□□ -0.71
USH2AO75445 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
USH2AO75445 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
USH2AO75445 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC10.59□□□□□ -0.71
USH2AO75445 AC136469.2-201ENST00000623944 1028 ntBASIC10.59□□□□□ -0.71
USH2AO75445 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
USH2AO75445 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC10.59□□□□□ -0.71
USH2AO75445 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
USH2AO75445 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
USH2AO75445 BX255925.1-201ENST00000566954 1854 ntBASIC10.59□□□□□ -0.71
USH2AO75445 AC093827.2-201ENST00000512654 315 ntBASIC10.58□□□□□ -0.72
USH2AO75445 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
USH2AO75445 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
USH2AO75445 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC10.58□□□□□ -0.72
USH2AO75445 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
USH2AO75445 AC027612.3-201ENST00000413684 1047 ntBASIC10.58□□□□□ -0.72
USH2AO75445 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC10.58□□□□□ -0.72
USH2AO75445 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC10.58□□□□□ -0.72
USH2AO75445 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC10.58□□□□□ -0.72
USH2AO75445 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC10.58□□□□□ -0.72
USH2AO75445 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC10.58□□□□□ -0.72
USH2AO75445 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC10.58□□□□□ -0.72
USH2AO75445 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
USH2AO75445 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
USH2AO75445 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
USH2AO75445 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
USH2AO75445 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
USH2AO75445 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
USH2AO75445 AL138724.1-201ENST00000606771 1088 ntBASIC10.57□□□□□ -0.72
USH2AO75445 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
USH2AO75445 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
USH2AO75445 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
USH2AO75445 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
USH2AO75445 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC10.57□□□□□ -0.72
USH2AO75445 ARL16-209ENST00000573715 763 ntTSL 3 BASIC10.57□□□□□ -0.72
USH2AO75445 ARL16-211ENST00000576135 694 ntTSL 3 BASIC10.57□□□□□ -0.72
USH2AO75445 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC10.57□□□□□ -0.72
USH2AO75445 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC10.57□□□□□ -0.72
USH2AO75445 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
USH2AO75445 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
USH2AO75445 TSPY26P-201ENST00000476365 1326 ntBASIC10.57□□□□□ -0.72
USH2AO75445 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
USH2AO75445 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC10.57□□□□□ -0.72
USH2AO75445 DUX4L19-201ENST00000557448 1267 ntBASIC10.57□□□□□ -0.72
USH2AO75445 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC10.57□□□□□ -0.72
USH2AO75445 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC10.57□□□□□ -0.72
USH2AO75445 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
USH2AO75445 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
USH2AO75445 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC10.56□□□□□ -0.72
USH2AO75445 TERF1P2-201ENST00000583350 1212 ntBASIC10.56□□□□□ -0.72
USH2AO75445 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
USH2AO75445 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC10.56□□□□□ -0.72
USH2AO75445 AC011298.3-201ENST00000615796 283 ntBASIC10.56□□□□□ -0.72
USH2AO75445 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
USH2AO75445 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
USH2AO75445 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
USH2AO75445 AC073111.5-205ENST00000641717 521 ntBASIC10.56□□□□□ -0.72
USH2AO75445 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
USH2AO75445 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
USH2AO75445 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
USH2AO75445 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
USH2AO75445 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
USH2AO75445 AC080038.1-201ENST00000611274 1154 ntBASIC10.56□□□□□ -0.72
USH2AO75445 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC10.56□□□□□ -0.72
USH2AO75445 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
USH2AO75445 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC10.55□□□□□ -0.72
USH2AO75445 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC10.55□□□□□ -0.72
USH2AO75445 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
USH2AO75445 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
USH2AO75445 CROCCP5-201ENST00000436658 830 ntBASIC10.55□□□□□ -0.72
USH2AO75445 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
USH2AO75445 DET1-205ENST00000558413 583 ntTSL 4 BASIC10.55□□□□□ -0.72
USH2AO75445 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC10.55□□□□□ -0.72
USH2AO75445 MIR4651-201ENST00000582622 73 ntBASIC10.55□□□□□ -0.72
USH2AO75445 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC10.55□□□□□ -0.72
USH2AO75445 AC006455.2-201ENST00000429931 906 ntBASIC10.55□□□□□ -0.72
USH2AO75445 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
USH2AO75445 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC10.55□□□□□ -0.72
USH2AO75445 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC10.55□□□□□ -0.72
USH2AO75445 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC10.54□□□□□ -0.72
USH2AO75445 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC10.54□□□□□ -0.72
USH2AO75445 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
USH2AO75445 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
USH2AO75445 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC10.54□□□□□ -0.72
USH2AO75445 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC10.54□□□□□ -0.72
USH2AO75445 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC10.54□□□□□ -0.72
USH2AO75445 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
USH2AO75445 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC10.54□□□□□ -0.72
USH2AO75445 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC10.54□□□□□ -0.72
USH2AO75445 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
USH2AO75445 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
USH2AO75445 AL449106.1-201ENST00000608517 1980 ntBASIC10.54□□□□□ -0.72
USH2AO75445 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
USH2AO75445 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms