Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
SCN10AQ9Y5Y9 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SCN10AQ9Y5Y9 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
SCN10AQ9Y5Y9 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
SCN10AQ9Y5Y9 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SCN10AQ9Y5Y9 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC26.02■■□□□ 1.76
SCN10AQ9Y5Y9 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
SCN10AQ9Y5Y9 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.76
SCN10AQ9Y5Y9 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SCN10AQ9Y5Y9 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SCN10AQ9Y5Y9 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC26.01■■□□□ 1.75
SCN10AQ9Y5Y9 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SCN10AQ9Y5Y9 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
SCN10AQ9Y5Y9 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC26■■□□□ 1.75
SCN10AQ9Y5Y9 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SCN10AQ9Y5Y9 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC26■■□□□ 1.75
SCN10AQ9Y5Y9 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC25.99■■□□□ 1.75
SCN10AQ9Y5Y9 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
SCN10AQ9Y5Y9 AL031432.3-201ENST00000607698 485 ntBASIC25.99■■□□□ 1.75
SCN10AQ9Y5Y9 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC25.99■■□□□ 1.75
SCN10AQ9Y5Y9 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
SCN10AQ9Y5Y9 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
SCN10AQ9Y5Y9 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
SCN10AQ9Y5Y9 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
SCN10AQ9Y5Y9 ZNRF2P3-201ENST00000424200 374 ntBASIC25.98■■□□□ 1.75
SCN10AQ9Y5Y9 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
SCN10AQ9Y5Y9 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
SCN10AQ9Y5Y9 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
SCN10AQ9Y5Y9 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC25.98■■□□□ 1.75
SCN10AQ9Y5Y9 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC25.98■■□□□ 1.75
SCN10AQ9Y5Y9 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
SCN10AQ9Y5Y9 PKM-203ENST00000389093 2279 ntTSL 5 BASIC25.98■■□□□ 1.75
SCN10AQ9Y5Y9 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
SCN10AQ9Y5Y9 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
SCN10AQ9Y5Y9 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC25.97■■□□□ 1.75
SCN10AQ9Y5Y9 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC25.97■■□□□ 1.75
SCN10AQ9Y5Y9 AC010501.1-201ENST00000606270 1962 ntBASIC25.97■■□□□ 1.75
SCN10AQ9Y5Y9 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC25.97■■□□□ 1.75
SCN10AQ9Y5Y9 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC25.97■■□□□ 1.75
SCN10AQ9Y5Y9 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
SCN10AQ9Y5Y9 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC25.96■■□□□ 1.75
SCN10AQ9Y5Y9 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
SCN10AQ9Y5Y9 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
SCN10AQ9Y5Y9 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
SCN10AQ9Y5Y9 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC25.94■■□□□ 1.74
SCN10AQ9Y5Y9 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC25.94■■□□□ 1.74
SCN10AQ9Y5Y9 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
SCN10AQ9Y5Y9 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC25.94■■□□□ 1.74
SCN10AQ9Y5Y9 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
SCN10AQ9Y5Y9 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC25.93■■□□□ 1.74
SCN10AQ9Y5Y9 RARRES2P6-201ENST00000567333 442 ntBASIC25.93■■□□□ 1.74
SCN10AQ9Y5Y9 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC25.93■■□□□ 1.74
SCN10AQ9Y5Y9 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
SCN10AQ9Y5Y9 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC25.93■■□□□ 1.74
SCN10AQ9Y5Y9 EBPL-204ENST00000378272 766 ntTSL 3 BASIC25.93■■□□□ 1.74
SCN10AQ9Y5Y9 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC25.92■■□□□ 1.74
SCN10AQ9Y5Y9 GUK1-205ENST00000366722 850 ntTSL 3 BASIC25.92■■□□□ 1.74
SCN10AQ9Y5Y9 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC25.92■■□□□ 1.74
SCN10AQ9Y5Y9 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC25.92■■□□□ 1.74
SCN10AQ9Y5Y9 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
SCN10AQ9Y5Y9 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
SCN10AQ9Y5Y9 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
SCN10AQ9Y5Y9 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC25.92■■□□□ 1.74
SCN10AQ9Y5Y9 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
SCN10AQ9Y5Y9 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SCN10AQ9Y5Y9 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
SCN10AQ9Y5Y9 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC25.9■■□□□ 1.74
SCN10AQ9Y5Y9 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC25.9■■□□□ 1.74
SCN10AQ9Y5Y9 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC25.9■■□□□ 1.74
SCN10AQ9Y5Y9 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SCN10AQ9Y5Y9 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC25.9■■□□□ 1.74
SCN10AQ9Y5Y9 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SCN10AQ9Y5Y9 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
SCN10AQ9Y5Y9 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
SCN10AQ9Y5Y9 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC25.89■■□□□ 1.74
SCN10AQ9Y5Y9 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.74
SCN10AQ9Y5Y9 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC25.89■■□□□ 1.74
SCN10AQ9Y5Y9 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
SCN10AQ9Y5Y9 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC25.89■■□□□ 1.73
SCN10AQ9Y5Y9 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC25.88■■□□□ 1.73
SCN10AQ9Y5Y9 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
SCN10AQ9Y5Y9 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SCN10AQ9Y5Y9 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC25.87■■□□□ 1.73
SCN10AQ9Y5Y9 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC25.87■■□□□ 1.73
SCN10AQ9Y5Y9 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
SCN10AQ9Y5Y9 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SCN10AQ9Y5Y9 AC026271.2-201ENST00000428091 497 ntBASIC25.87■■□□□ 1.73
SCN10AQ9Y5Y9 PBX2P1-201ENST00000493219 1291 ntBASIC25.87■■□□□ 1.73
SCN10AQ9Y5Y9 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SCN10AQ9Y5Y9 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
SCN10AQ9Y5Y9 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC25.86■■□□□ 1.73
SCN10AQ9Y5Y9 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC25.86■■□□□ 1.73
SCN10AQ9Y5Y9 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SCN10AQ9Y5Y9 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC25.86■■□□□ 1.73
SCN10AQ9Y5Y9 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
SCN10AQ9Y5Y9 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SCN10AQ9Y5Y9 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC25.86■■□□□ 1.73
SCN10AQ9Y5Y9 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SCN10AQ9Y5Y9 UNC93B3-201ENST00000308076 687 ntBASIC25.86■■□□□ 1.73
SCN10AQ9Y5Y9 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms