Protein–RNA interactions for Protein: Q9Y5E3

PCDHB6, Protocadherin beta-6, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB6Q9Y5E3 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
PCDHB6Q9Y5E3 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
PCDHB6Q9Y5E3 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC26.64■■□□□ 1.86
PCDHB6Q9Y5E3 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.86
PCDHB6Q9Y5E3 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC26.64■■□□□ 1.86
PCDHB6Q9Y5E3 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC26.64■■□□□ 1.86
PCDHB6Q9Y5E3 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
PCDHB6Q9Y5E3 AL592295.1-201ENST00000400984 884 ntBASIC26.64■■□□□ 1.86
PCDHB6Q9Y5E3 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
PCDHB6Q9Y5E3 AC139795.1-202ENST00000500444 432 ntBASIC26.64■■□□□ 1.86
PCDHB6Q9Y5E3 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.85
PCDHB6Q9Y5E3 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
PCDHB6Q9Y5E3 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
PCDHB6Q9Y5E3 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
PCDHB6Q9Y5E3 LINC00543-201ENST00000567234 1845 ntBASIC26.63■■□□□ 1.85
PCDHB6Q9Y5E3 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
PCDHB6Q9Y5E3 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
PCDHB6Q9Y5E3 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
PCDHB6Q9Y5E3 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC26.63■■□□□ 1.85
PCDHB6Q9Y5E3 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
PCDHB6Q9Y5E3 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC26.62■■□□□ 1.85
PCDHB6Q9Y5E3 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC26.62■■□□□ 1.85
PCDHB6Q9Y5E3 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
PCDHB6Q9Y5E3 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
PCDHB6Q9Y5E3 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
PCDHB6Q9Y5E3 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC26.62■■□□□ 1.85
PCDHB6Q9Y5E3 PVT1_1.1-201ENST00000615125 194 ntBASIC26.62■■□□□ 1.85
PCDHB6Q9Y5E3 AC012354.3-201ENST00000623734 483 ntBASIC26.62■■□□□ 1.85
PCDHB6Q9Y5E3 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
PCDHB6Q9Y5E3 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC26.61■■□□□ 1.85
PCDHB6Q9Y5E3 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
PCDHB6Q9Y5E3 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC26.61■■□□□ 1.85
PCDHB6Q9Y5E3 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
PCDHB6Q9Y5E3 GUK1-208ENST00000366728 842 ntTSL 2 BASIC26.61■■□□□ 1.85
PCDHB6Q9Y5E3 AL033527.3-201ENST00000566366 1196 ntBASIC26.61■■□□□ 1.85
PCDHB6Q9Y5E3 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
PCDHB6Q9Y5E3 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
PCDHB6Q9Y5E3 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
PCDHB6Q9Y5E3 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
PCDHB6Q9Y5E3 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
PCDHB6Q9Y5E3 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
PCDHB6Q9Y5E3 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
PCDHB6Q9Y5E3 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PCDHB6Q9Y5E3 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
PCDHB6Q9Y5E3 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PCDHB6Q9Y5E3 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PCDHB6Q9Y5E3 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
PCDHB6Q9Y5E3 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PCDHB6Q9Y5E3 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
PCDHB6Q9Y5E3 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PCDHB6Q9Y5E3 AC090877.2-201ENST00000558441 1738 ntBASIC26.59■■□□□ 1.85
PCDHB6Q9Y5E3 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC26.59■■□□□ 1.85
PCDHB6Q9Y5E3 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
PCDHB6Q9Y5E3 AC019171.1-201ENST00000601251 1056 ntBASIC26.59■■□□□ 1.85
PCDHB6Q9Y5E3 BHLHE23-202ENST00000612929 1109 ntBASIC26.59■■□□□ 1.85
PCDHB6Q9Y5E3 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC26.59■■□□□ 1.85
PCDHB6Q9Y5E3 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC26.58■■□□□ 1.85
PCDHB6Q9Y5E3 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PCDHB6Q9Y5E3 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
PCDHB6Q9Y5E3 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PCDHB6Q9Y5E3 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PCDHB6Q9Y5E3 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC26.58■■□□□ 1.84
PCDHB6Q9Y5E3 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC26.58■■□□□ 1.84
PCDHB6Q9Y5E3 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
PCDHB6Q9Y5E3 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
PCDHB6Q9Y5E3 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
PCDHB6Q9Y5E3 MTX2-204ENST00000443241 799 ntTSL 3 BASIC26.57■■□□□ 1.84
PCDHB6Q9Y5E3 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
PCDHB6Q9Y5E3 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC26.57■■□□□ 1.84
PCDHB6Q9Y5E3 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC26.57■■□□□ 1.84
PCDHB6Q9Y5E3 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
PCDHB6Q9Y5E3 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PCDHB6Q9Y5E3 BEX3-202ENST00000372634 753 ntTSL 2 BASIC26.56■■□□□ 1.84
PCDHB6Q9Y5E3 IDNK-201ENST00000376417 511 ntTSL 5 BASIC26.56■■□□□ 1.84
PCDHB6Q9Y5E3 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PCDHB6Q9Y5E3 AC010980.1-201ENST00000587192 1142 ntBASIC26.56■■□□□ 1.84
PCDHB6Q9Y5E3 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC26.56■■□□□ 1.84
PCDHB6Q9Y5E3 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PCDHB6Q9Y5E3 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
PCDHB6Q9Y5E3 THRA-202ENST00000394121 2260 ntTSL 2 BASIC26.55■■□□□ 1.84
PCDHB6Q9Y5E3 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
PCDHB6Q9Y5E3 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC26.55■■□□□ 1.84
PCDHB6Q9Y5E3 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC26.55■■□□□ 1.84
PCDHB6Q9Y5E3 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC26.55■■□□□ 1.84
PCDHB6Q9Y5E3 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
PCDHB6Q9Y5E3 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC26.54■■□□□ 1.84
PCDHB6Q9Y5E3 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
PCDHB6Q9Y5E3 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC26.54■■□□□ 1.84
PCDHB6Q9Y5E3 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC26.54■■□□□ 1.84
PCDHB6Q9Y5E3 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC26.54■■□□□ 1.84
PCDHB6Q9Y5E3 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
PCDHB6Q9Y5E3 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC26.53■■□□□ 1.84
PCDHB6Q9Y5E3 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PCDHB6Q9Y5E3 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PCDHB6Q9Y5E3 AC004812.2-201ENST00000611079 2094 ntBASIC26.53■■□□□ 1.84
PCDHB6Q9Y5E3 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
PCDHB6Q9Y5E3 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PCDHB6Q9Y5E3 SSSCA1-AS1-201ENST00000567594 614 ntBASIC26.53■■□□□ 1.84
PCDHB6Q9Y5E3 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC26.53■■□□□ 1.84
PCDHB6Q9Y5E3 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC26.53■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms