Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC30.82■■■□□ 2.53
SPG7Q9UQ90 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC30.82■■■□□ 2.53
SPG7Q9UQ90 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC30.82■■■□□ 2.53
SPG7Q9UQ90 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC30.82■■■□□ 2.52
SPG7Q9UQ90 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
SPG7Q9UQ90 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC30.82■■■□□ 2.52
SPG7Q9UQ90 LBH-205ENST00000407930 756 ntTSL 2 BASIC30.82■■■□□ 2.52
SPG7Q9UQ90 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC30.81■■■□□ 2.52
SPG7Q9UQ90 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC30.81■■■□□ 2.52
SPG7Q9UQ90 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC30.81■■■□□ 2.52
SPG7Q9UQ90 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC30.81■■■□□ 2.52
SPG7Q9UQ90 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
SPG7Q9UQ90 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC30.8■■■□□ 2.52
SPG7Q9UQ90 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
SPG7Q9UQ90 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
SPG7Q9UQ90 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
SPG7Q9UQ90 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC30.79■■■□□ 2.52
SPG7Q9UQ90 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
SPG7Q9UQ90 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC30.79■■■□□ 2.52
SPG7Q9UQ90 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
SPG7Q9UQ90 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC30.79■■■□□ 2.52
SPG7Q9UQ90 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
SPG7Q9UQ90 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC30.79■■■□□ 2.52
SPG7Q9UQ90 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC30.79■■■□□ 2.52
SPG7Q9UQ90 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
SPG7Q9UQ90 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC30.78■■■□□ 2.52
SPG7Q9UQ90 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC30.78■■■□□ 2.52
SPG7Q9UQ90 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
SPG7Q9UQ90 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC30.78■■■□□ 2.52
SPG7Q9UQ90 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
SPG7Q9UQ90 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
SPG7Q9UQ90 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
SPG7Q9UQ90 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
SPG7Q9UQ90 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
SPG7Q9UQ90 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
SPG7Q9UQ90 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC30.77■■■□□ 2.52
SPG7Q9UQ90 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC30.77■■■□□ 2.52
SPG7Q9UQ90 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC30.77■■■□□ 2.52
SPG7Q9UQ90 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
SPG7Q9UQ90 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
SPG7Q9UQ90 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
SPG7Q9UQ90 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC30.76■■■□□ 2.51
SPG7Q9UQ90 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC30.76■■■□□ 2.51
SPG7Q9UQ90 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC30.75■■■□□ 2.51
SPG7Q9UQ90 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
SPG7Q9UQ90 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC30.74■■■□□ 2.51
SPG7Q9UQ90 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC30.74■■■□□ 2.51
SPG7Q9UQ90 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC30.74■■■□□ 2.51
SPG7Q9UQ90 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC30.74■■■□□ 2.51
SPG7Q9UQ90 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC30.74■■■□□ 2.51
SPG7Q9UQ90 AC010501.1-201ENST00000606270 1962 ntBASIC30.74■■■□□ 2.51
SPG7Q9UQ90 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC30.73■■■□□ 2.51
SPG7Q9UQ90 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC30.73■■■□□ 2.51
SPG7Q9UQ90 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC30.73■■■□□ 2.51
SPG7Q9UQ90 AC106739.1-201ENST00000617035 715 ntBASIC30.73■■■□□ 2.51
SPG7Q9UQ90 PKM-203ENST00000389093 2279 ntTSL 5 BASIC30.73■■■□□ 2.51
SPG7Q9UQ90 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC30.73■■■□□ 2.51
SPG7Q9UQ90 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
SPG7Q9UQ90 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC30.73■■■□□ 2.51
SPG7Q9UQ90 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
SPG7Q9UQ90 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC30.72■■■□□ 2.51
SPG7Q9UQ90 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC30.72■■■□□ 2.51
SPG7Q9UQ90 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC30.72■■■□□ 2.51
SPG7Q9UQ90 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
SPG7Q9UQ90 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC30.72■■■□□ 2.51
SPG7Q9UQ90 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
SPG7Q9UQ90 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
SPG7Q9UQ90 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
SPG7Q9UQ90 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC30.71■■■□□ 2.51
SPG7Q9UQ90 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
SPG7Q9UQ90 PBX2P1-201ENST00000493219 1291 ntBASIC30.7■■■□□ 2.51
SPG7Q9UQ90 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC30.7■■■□□ 2.51
SPG7Q9UQ90 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
SPG7Q9UQ90 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
SPG7Q9UQ90 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC30.69■■■□□ 2.5
SPG7Q9UQ90 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
SPG7Q9UQ90 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
SPG7Q9UQ90 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC30.68■■■□□ 2.5
SPG7Q9UQ90 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC30.68■■■□□ 2.5
SPG7Q9UQ90 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
SPG7Q9UQ90 AC004448.1-201ENST00000458332 883 ntBASIC30.67■■■□□ 2.5
SPG7Q9UQ90 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC30.67■■■□□ 2.5
SPG7Q9UQ90 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
SPG7Q9UQ90 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
SPG7Q9UQ90 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC30.66■■■□□ 2.5
SPG7Q9UQ90 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC30.66■■■□□ 2.5
SPG7Q9UQ90 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC30.66■■■□□ 2.5
SPG7Q9UQ90 UNC93B3-201ENST00000308076 687 ntBASIC30.66■■■□□ 2.5
SPG7Q9UQ90 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
SPG7Q9UQ90 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC30.66■■■□□ 2.5
SPG7Q9UQ90 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
SPG7Q9UQ90 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC30.65■■■□□ 2.5
SPG7Q9UQ90 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC30.65■■■□□ 2.5
SPG7Q9UQ90 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
SPG7Q9UQ90 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC30.65■■■□□ 2.5
SPG7Q9UQ90 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC30.65■■■□□ 2.5
SPG7Q9UQ90 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
SPG7Q9UQ90 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
SPG7Q9UQ90 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC30.64■■■□□ 2.5
SPG7Q9UQ90 EBPL-204ENST00000378272 766 ntTSL 3 BASIC30.64■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms