Protein–RNA interactions for Protein: Q9H3M0

KCNF1, Potassium voltage-gated channel subfamily F member 1, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNF1Q9H3M0 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
KCNF1Q9H3M0 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
KCNF1Q9H3M0 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
KCNF1Q9H3M0 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
KCNF1Q9H3M0 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
KCNF1Q9H3M0 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
KCNF1Q9H3M0 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.57■■□□□ 1.68
KCNF1Q9H3M0 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
KCNF1Q9H3M0 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
KCNF1Q9H3M0 AC087741.3-201ENST00000624270 1347 ntBASIC25.57■■□□□ 1.68
KCNF1Q9H3M0 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
KCNF1Q9H3M0 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
KCNF1Q9H3M0 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC25.56■■□□□ 1.68
KCNF1Q9H3M0 AC021231.2-201ENST00000594613 730 ntBASIC25.56■■□□□ 1.68
KCNF1Q9H3M0 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
KCNF1Q9H3M0 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
KCNF1Q9H3M0 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC25.55■■□□□ 1.68
KCNF1Q9H3M0 USP48-205ENST00000421625 2818 ntTSL 2 BASIC25.55■■□□□ 1.68
KCNF1Q9H3M0 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC25.55■■□□□ 1.68
KCNF1Q9H3M0 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
KCNF1Q9H3M0 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
KCNF1Q9H3M0 TERT-206ENST00000508104 2486 ntTSL 5 BASIC25.55■■□□□ 1.68
KCNF1Q9H3M0 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
KCNF1Q9H3M0 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
KCNF1Q9H3M0 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
KCNF1Q9H3M0 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC25.55■■□□□ 1.68
KCNF1Q9H3M0 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC25.55■■□□□ 1.68
KCNF1Q9H3M0 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
KCNF1Q9H3M0 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
KCNF1Q9H3M0 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
KCNF1Q9H3M0 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC25.54■■□□□ 1.68
KCNF1Q9H3M0 EFS-203ENST00000429593 2610 ntTSL 2 BASIC25.54■■□□□ 1.68
KCNF1Q9H3M0 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
KCNF1Q9H3M0 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
KCNF1Q9H3M0 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC25.54■■□□□ 1.68
KCNF1Q9H3M0 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
KCNF1Q9H3M0 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
KCNF1Q9H3M0 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
KCNF1Q9H3M0 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
KCNF1Q9H3M0 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
KCNF1Q9H3M0 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
KCNF1Q9H3M0 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
KCNF1Q9H3M0 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
KCNF1Q9H3M0 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC25.53■■□□□ 1.68
KCNF1Q9H3M0 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
KCNF1Q9H3M0 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
KCNF1Q9H3M0 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
KCNF1Q9H3M0 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC25.52■■□□□ 1.68
KCNF1Q9H3M0 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
KCNF1Q9H3M0 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
KCNF1Q9H3M0 C1orf229-201ENST00000623686 2258 ntBASIC25.51■■□□□ 1.67
KCNF1Q9H3M0 AC148477.6-201ENST00000623746 465 ntBASIC25.51■■□□□ 1.67
KCNF1Q9H3M0 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
KCNF1Q9H3M0 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
KCNF1Q9H3M0 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
KCNF1Q9H3M0 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
KCNF1Q9H3M0 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
KCNF1Q9H3M0 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
KCNF1Q9H3M0 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
KCNF1Q9H3M0 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC25.5■■□□□ 1.67
KCNF1Q9H3M0 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
KCNF1Q9H3M0 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
KCNF1Q9H3M0 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
KCNF1Q9H3M0 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC25.49■■□□□ 1.67
KCNF1Q9H3M0 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
KCNF1Q9H3M0 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
KCNF1Q9H3M0 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
KCNF1Q9H3M0 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
KCNF1Q9H3M0 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
KCNF1Q9H3M0 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
KCNF1Q9H3M0 MED25-210ENST00000612854 801 ntTSL 5 BASIC25.49■■□□□ 1.67
KCNF1Q9H3M0 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
KCNF1Q9H3M0 MED25-214ENST00000622402 642 ntTSL 5 BASIC25.49■■□□□ 1.67
KCNF1Q9H3M0 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
KCNF1Q9H3M0 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
KCNF1Q9H3M0 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
KCNF1Q9H3M0 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
KCNF1Q9H3M0 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
KCNF1Q9H3M0 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
KCNF1Q9H3M0 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
KCNF1Q9H3M0 CHML-204ENST00000638121 920 ntTSL 2 BASIC25.48■■□□□ 1.67
KCNF1Q9H3M0 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
KCNF1Q9H3M0 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
KCNF1Q9H3M0 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
KCNF1Q9H3M0 AL024507.2-201ENST00000606070 2574 ntBASIC25.48■■□□□ 1.67
KCNF1Q9H3M0 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
KCNF1Q9H3M0 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
KCNF1Q9H3M0 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC25.47■■□□□ 1.67
KCNF1Q9H3M0 NRG1-221ENST00000614767 762 ntTSL 5 BASIC25.47■■□□□ 1.67
KCNF1Q9H3M0 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
KCNF1Q9H3M0 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
KCNF1Q9H3M0 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
KCNF1Q9H3M0 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
KCNF1Q9H3M0 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
KCNF1Q9H3M0 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC25.47■■□□□ 1.67
KCNF1Q9H3M0 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
KCNF1Q9H3M0 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC25.46■■□□□ 1.67
KCNF1Q9H3M0 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
KCNF1Q9H3M0 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
KCNF1Q9H3M0 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms