Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
KRTAP4-1Q9BYQ7 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
KRTAP4-1Q9BYQ7 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
KRTAP4-1Q9BYQ7 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC12.31□□□□□ -0.44
KRTAP4-1Q9BYQ7 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
KRTAP4-1Q9BYQ7 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KRTAP4-1Q9BYQ7 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
KRTAP4-1Q9BYQ7 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
KRTAP4-1Q9BYQ7 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
KRTAP4-1Q9BYQ7 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
KRTAP4-1Q9BYQ7 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC12.3□□□□□ -0.44
KRTAP4-1Q9BYQ7 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
KRTAP4-1Q9BYQ7 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC12.3□□□□□ -0.44
KRTAP4-1Q9BYQ7 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
KRTAP4-1Q9BYQ7 MIR6722-201ENST00000617286 78 ntBASIC12.3□□□□□ -0.44
KRTAP4-1Q9BYQ7 AC090877.2-201ENST00000558441 1738 ntBASIC12.3□□□□□ -0.44
KRTAP4-1Q9BYQ7 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
KRTAP4-1Q9BYQ7 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
KRTAP4-1Q9BYQ7 AC096887.2-201ENST00000623443 1957 ntBASIC12.3□□□□□ -0.44
KRTAP4-1Q9BYQ7 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
KRTAP4-1Q9BYQ7 ERN1-208ENST00000606895 2068 ntBASIC12.3□□□□□ -0.44
KRTAP4-1Q9BYQ7 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
KRTAP4-1Q9BYQ7 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
KRTAP4-1Q9BYQ7 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
KRTAP4-1Q9BYQ7 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
KRTAP4-1Q9BYQ7 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
KRTAP4-1Q9BYQ7 AC142086.6-201ENST00000621154 1765 ntBASIC12.29□□□□□ -0.44
KRTAP4-1Q9BYQ7 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
KRTAP4-1Q9BYQ7 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
KRTAP4-1Q9BYQ7 HYI-206ENST00000372434 1025 ntTSL 5 BASIC12.29□□□□□ -0.44
KRTAP4-1Q9BYQ7 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
KRTAP4-1Q9BYQ7 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC12.29□□□□□ -0.44
KRTAP4-1Q9BYQ7 LGR4-203ENST00000480977 492 ntTSL 2 BASIC12.29□□□□□ -0.44
KRTAP4-1Q9BYQ7 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC12.29□□□□□ -0.44
KRTAP4-1Q9BYQ7 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC12.29□□□□□ -0.44
KRTAP4-1Q9BYQ7 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC12.29□□□□□ -0.44
KRTAP4-1Q9BYQ7 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
KRTAP4-1Q9BYQ7 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
KRTAP4-1Q9BYQ7 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC12.29□□□□□ -0.44
KRTAP4-1Q9BYQ7 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
KRTAP4-1Q9BYQ7 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
KRTAP4-1Q9BYQ7 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC12.28□□□□□ -0.44
KRTAP4-1Q9BYQ7 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
KRTAP4-1Q9BYQ7 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
KRTAP4-1Q9BYQ7 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
KRTAP4-1Q9BYQ7 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC12.28□□□□□ -0.44
KRTAP4-1Q9BYQ7 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC12.28□□□□□ -0.44
KRTAP4-1Q9BYQ7 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
KRTAP4-1Q9BYQ7 AL136967.2-201ENST00000623968 743 ntBASIC12.28□□□□□ -0.44
KRTAP4-1Q9BYQ7 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC12.28□□□□□ -0.44
KRTAP4-1Q9BYQ7 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
KRTAP4-1Q9BYQ7 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
KRTAP4-1Q9BYQ7 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
KRTAP4-1Q9BYQ7 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC12.28□□□□□ -0.44
KRTAP4-1Q9BYQ7 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
KRTAP4-1Q9BYQ7 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
KRTAP4-1Q9BYQ7 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
KRTAP4-1Q9BYQ7 AC105265.2-201ENST00000467189 838 ntBASIC12.27□□□□□ -0.45
KRTAP4-1Q9BYQ7 STOX2-205ENST00000513034 807 ntTSL 3 BASIC12.27□□□□□ -0.45
KRTAP4-1Q9BYQ7 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC12.27□□□□□ -0.45
KRTAP4-1Q9BYQ7 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC12.27□□□□□ -0.45
KRTAP4-1Q9BYQ7 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC12.27□□□□□ -0.45
KRTAP4-1Q9BYQ7 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
KRTAP4-1Q9BYQ7 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC12.27□□□□□ -0.45
KRTAP4-1Q9BYQ7 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
KRTAP4-1Q9BYQ7 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC12.26□□□□□ -0.45
KRTAP4-1Q9BYQ7 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC12.26□□□□□ -0.45
KRTAP4-1Q9BYQ7 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
KRTAP4-1Q9BYQ7 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
KRTAP4-1Q9BYQ7 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC12.26□□□□□ -0.45
KRTAP4-1Q9BYQ7 LBH-205ENST00000407930 756 ntTSL 2 BASIC12.26□□□□□ -0.45
KRTAP4-1Q9BYQ7 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
KRTAP4-1Q9BYQ7 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC12.26□□□□□ -0.45
KRTAP4-1Q9BYQ7 AF213884.3-201ENST00000563833 479 ntBASIC12.26□□□□□ -0.45
KRTAP4-1Q9BYQ7 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
KRTAP4-1Q9BYQ7 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC12.26□□□□□ -0.45
KRTAP4-1Q9BYQ7 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
KRTAP4-1Q9BYQ7 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
KRTAP4-1Q9BYQ7 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
KRTAP4-1Q9BYQ7 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
KRTAP4-1Q9BYQ7 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC12.25□□□□□ -0.45
KRTAP4-1Q9BYQ7 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
KRTAP4-1Q9BYQ7 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC12.25□□□□□ -0.45
KRTAP4-1Q9BYQ7 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
KRTAP4-1Q9BYQ7 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
KRTAP4-1Q9BYQ7 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC12.25□□□□□ -0.45
KRTAP4-1Q9BYQ7 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC12.25□□□□□ -0.45
KRTAP4-1Q9BYQ7 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC12.25□□□□□ -0.45
KRTAP4-1Q9BYQ7 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
KRTAP4-1Q9BYQ7 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC12.25□□□□□ -0.45
KRTAP4-1Q9BYQ7 AL355001.2-201ENST00000620617 1191 ntBASIC12.25□□□□□ -0.45
KRTAP4-1Q9BYQ7 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
KRTAP4-1Q9BYQ7 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC12.25□□□□□ -0.45
KRTAP4-1Q9BYQ7 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
KRTAP4-1Q9BYQ7 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
KRTAP4-1Q9BYQ7 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
KRTAP4-1Q9BYQ7 EDA-201ENST00000338901 1233 ntBASIC12.24□□□□□ -0.45
KRTAP4-1Q9BYQ7 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
KRTAP4-1Q9BYQ7 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC12.24□□□□□ -0.45
KRTAP4-1Q9BYQ7 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms