Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.65■□□□□ 0.9
USB1Q9BQ65 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
USB1Q9BQ65 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
USB1Q9BQ65 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
USB1Q9BQ65 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
USB1Q9BQ65 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USB1Q9BQ65 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.64■□□□□ 0.89
USB1Q9BQ65 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
USB1Q9BQ65 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USB1Q9BQ65 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.64■□□□□ 0.89
USB1Q9BQ65 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
USB1Q9BQ65 AC010501.1-201ENST00000606270 1962 ntBASIC20.64■□□□□ 0.89
USB1Q9BQ65 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
USB1Q9BQ65 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USB1Q9BQ65 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
USB1Q9BQ65 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USB1Q9BQ65 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USB1Q9BQ65 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
USB1Q9BQ65 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USB1Q9BQ65 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
USB1Q9BQ65 FOXO3B-201ENST00000395675 1928 ntBASIC20.63■□□□□ 0.89
USB1Q9BQ65 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
USB1Q9BQ65 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
USB1Q9BQ65 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
USB1Q9BQ65 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
USB1Q9BQ65 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
USB1Q9BQ65 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
USB1Q9BQ65 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
USB1Q9BQ65 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
USB1Q9BQ65 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.61■□□□□ 0.89
USB1Q9BQ65 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
USB1Q9BQ65 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
USB1Q9BQ65 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.61■□□□□ 0.89
USB1Q9BQ65 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
USB1Q9BQ65 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.61■□□□□ 0.89
USB1Q9BQ65 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
USB1Q9BQ65 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
USB1Q9BQ65 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
USB1Q9BQ65 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
USB1Q9BQ65 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
USB1Q9BQ65 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
USB1Q9BQ65 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
USB1Q9BQ65 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.6■□□□□ 0.89
USB1Q9BQ65 MIR4787-201ENST00000607364 84 ntBASIC20.6■□□□□ 0.89
USB1Q9BQ65 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.6■□□□□ 0.89
USB1Q9BQ65 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.6■□□□□ 0.89
USB1Q9BQ65 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
USB1Q9BQ65 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
USB1Q9BQ65 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
USB1Q9BQ65 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
USB1Q9BQ65 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
USB1Q9BQ65 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
USB1Q9BQ65 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.59■□□□□ 0.89
USB1Q9BQ65 MIR4281-201ENST00000580852 62 ntBASIC20.59■□□□□ 0.89
USB1Q9BQ65 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
USB1Q9BQ65 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.59■□□□□ 0.89
USB1Q9BQ65 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
USB1Q9BQ65 AC021242.3-201ENST00000607598 1377 ntBASIC20.59■□□□□ 0.89
USB1Q9BQ65 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
USB1Q9BQ65 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
USB1Q9BQ65 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.58■□□□□ 0.89
USB1Q9BQ65 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
USB1Q9BQ65 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
USB1Q9BQ65 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.58■□□□□ 0.89
USB1Q9BQ65 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
USB1Q9BQ65 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.58■□□□□ 0.89
USB1Q9BQ65 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.58■□□□□ 0.89
USB1Q9BQ65 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.58■□□□□ 0.89
USB1Q9BQ65 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
USB1Q9BQ65 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
USB1Q9BQ65 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.58■□□□□ 0.88
USB1Q9BQ65 AC092803.2-201ENST00000564287 1899 ntBASIC20.58■□□□□ 0.88
USB1Q9BQ65 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
USB1Q9BQ65 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
USB1Q9BQ65 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.57■□□□□ 0.88
USB1Q9BQ65 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
USB1Q9BQ65 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
USB1Q9BQ65 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
USB1Q9BQ65 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.57■□□□□ 0.88
USB1Q9BQ65 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
USB1Q9BQ65 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
USB1Q9BQ65 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
USB1Q9BQ65 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.56■□□□□ 0.88
USB1Q9BQ65 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
USB1Q9BQ65 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
USB1Q9BQ65 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
USB1Q9BQ65 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.56■□□□□ 0.88
USB1Q9BQ65 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
USB1Q9BQ65 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.56■□□□□ 0.88
USB1Q9BQ65 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.56■□□□□ 0.88
USB1Q9BQ65 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
USB1Q9BQ65 AC145676.1-201ENST00000514988 2004 ntBASIC20.56■□□□□ 0.88
USB1Q9BQ65 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
USB1Q9BQ65 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
USB1Q9BQ65 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
USB1Q9BQ65 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
USB1Q9BQ65 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.55■□□□□ 0.88
USB1Q9BQ65 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.55■□□□□ 0.88
USB1Q9BQ65 AC096887.2-201ENST00000623443 1957 ntBASIC20.55■□□□□ 0.88
USB1Q9BQ65 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms