Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CKAP2Q8WWK9 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CKAP2Q8WWK9 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CKAP2Q8WWK9 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CKAP2Q8WWK9 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CKAP2Q8WWK9 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
CKAP2Q8WWK9 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CKAP2Q8WWK9 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CKAP2Q8WWK9 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
CKAP2Q8WWK9 RPS2P35-201ENST00000443417 897 ntBASIC23.2■■□□□ 1.3
CKAP2Q8WWK9 CHST11-202ENST00000546689 756 ntTSL 2 BASIC23.2■■□□□ 1.3
CKAP2Q8WWK9 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC23.2■■□□□ 1.3
CKAP2Q8WWK9 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CKAP2Q8WWK9 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CKAP2Q8WWK9 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CKAP2Q8WWK9 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CKAP2Q8WWK9 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CKAP2Q8WWK9 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
CKAP2Q8WWK9 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.19■■□□□ 1.3
CKAP2Q8WWK9 STK25-234ENST00000535007 2459 ntTSL 2 BASIC23.19■■□□□ 1.3
CKAP2Q8WWK9 LINC00565-201ENST00000562710 2331 ntBASIC23.19■■□□□ 1.3
CKAP2Q8WWK9 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CKAP2Q8WWK9 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC23.19■■□□□ 1.3
CKAP2Q8WWK9 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CKAP2Q8WWK9 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC23.18■■□□□ 1.3
CKAP2Q8WWK9 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CKAP2Q8WWK9 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CKAP2Q8WWK9 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CKAP2Q8WWK9 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
CKAP2Q8WWK9 AL162393.1-201ENST00000437852 946 ntBASIC23.17■■□□□ 1.3
CKAP2Q8WWK9 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC23.17■■□□□ 1.3
CKAP2Q8WWK9 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC23.17■■□□□ 1.3
CKAP2Q8WWK9 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CKAP2Q8WWK9 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC23.16■■□□□ 1.3
CKAP2Q8WWK9 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CKAP2Q8WWK9 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CKAP2Q8WWK9 DUX4L13-201ENST00000554103 1267 ntBASIC23.16■■□□□ 1.3
CKAP2Q8WWK9 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
CKAP2Q8WWK9 DUX4L15-201ENST00000611059 1267 ntBASIC23.16■■□□□ 1.3
CKAP2Q8WWK9 DUX4L23-201ENST00000615195 1269 ntBASIC23.16■■□□□ 1.3
CKAP2Q8WWK9 DUX4L24-201ENST00000617576 1269 ntBASIC23.16■■□□□ 1.3
CKAP2Q8WWK9 DUX4L22-201ENST00000618238 1269 ntBASIC23.16■■□□□ 1.3
CKAP2Q8WWK9 DUX4L20-201ENST00000619712 1269 ntBASIC23.16■■□□□ 1.3
CKAP2Q8WWK9 DUX4L21-201ENST00000622058 1269 ntBASIC23.16■■□□□ 1.3
CKAP2Q8WWK9 DUX4L10-201ENST00000622460 1267 ntBASIC23.16■■□□□ 1.3
CKAP2Q8WWK9 DUX4L25-201ENST00000624915 1269 ntBASIC23.16■■□□□ 1.3
CKAP2Q8WWK9 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CKAP2Q8WWK9 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CKAP2Q8WWK9 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CKAP2Q8WWK9 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CKAP2Q8WWK9 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CKAP2Q8WWK9 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CKAP2Q8WWK9 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CKAP2Q8WWK9 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CKAP2Q8WWK9 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CKAP2Q8WWK9 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
CKAP2Q8WWK9 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CKAP2Q8WWK9 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CKAP2Q8WWK9 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.14■■□□□ 1.3
CKAP2Q8WWK9 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CKAP2Q8WWK9 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC23.14■■□□□ 1.3
CKAP2Q8WWK9 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
CKAP2Q8WWK9 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
CKAP2Q8WWK9 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC23.14■■□□□ 1.29
CKAP2Q8WWK9 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC23.14■■□□□ 1.29
CKAP2Q8WWK9 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC23.14■■□□□ 1.29
CKAP2Q8WWK9 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CKAP2Q8WWK9 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CKAP2Q8WWK9 HLA-V-202ENST00000446817 847 ntBASIC23.14■■□□□ 1.29
CKAP2Q8WWK9 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC23.14■■□□□ 1.29
CKAP2Q8WWK9 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC23.14■■□□□ 1.29
CKAP2Q8WWK9 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CKAP2Q8WWK9 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CKAP2Q8WWK9 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
CKAP2Q8WWK9 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
CKAP2Q8WWK9 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CKAP2Q8WWK9 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
CKAP2Q8WWK9 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CKAP2Q8WWK9 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CKAP2Q8WWK9 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CKAP2Q8WWK9 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CKAP2Q8WWK9 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CKAP2Q8WWK9 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
CKAP2Q8WWK9 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
CKAP2Q8WWK9 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
CKAP2Q8WWK9 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CKAP2Q8WWK9 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.12■■□□□ 1.29
CKAP2Q8WWK9 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CKAP2Q8WWK9 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
CKAP2Q8WWK9 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
CKAP2Q8WWK9 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
CKAP2Q8WWK9 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
CKAP2Q8WWK9 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CKAP2Q8WWK9 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC23.12■■□□□ 1.29
CKAP2Q8WWK9 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
CKAP2Q8WWK9 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CKAP2Q8WWK9 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CKAP2Q8WWK9 LINC01971-201ENST00000617888 1048 ntBASIC23.11■■□□□ 1.29
CKAP2Q8WWK9 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC23.11■■□□□ 1.29
CKAP2Q8WWK9 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms