Protein–RNA interactions for Protein: Q8N187

CARF, Calcium-responsive transcription factor, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARFQ8N187 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC22.35■■□□□ 1.17
CARFQ8N187 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CARFQ8N187 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
CARFQ8N187 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC22.34■■□□□ 1.17
CARFQ8N187 MIR6724-1-201ENST00000616420 92 ntBASIC22.34■■□□□ 1.17
CARFQ8N187 MIR6724-2-201ENST00000616483 92 ntBASIC22.34■■□□□ 1.17
CARFQ8N187 MIR6724-4-201ENST00000617390 92 ntBASIC22.34■■□□□ 1.17
CARFQ8N187 MIR6724-3-201ENST00000622482 92 ntBASIC22.34■■□□□ 1.17
CARFQ8N187 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC22.34■■□□□ 1.17
CARFQ8N187 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
CARFQ8N187 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CARFQ8N187 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
CARFQ8N187 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CARFQ8N187 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
CARFQ8N187 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.33■■□□□ 1.17
CARFQ8N187 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC22.33■■□□□ 1.17
CARFQ8N187 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
CARFQ8N187 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC22.33■■□□□ 1.17
CARFQ8N187 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC22.33■■□□□ 1.17
CARFQ8N187 SLC6A10P-202ENST00000431994 2058 ntBASIC22.33■■□□□ 1.17
CARFQ8N187 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CARFQ8N187 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CARFQ8N187 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC22.33■■□□□ 1.16
CARFQ8N187 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC22.32■■□□□ 1.16
CARFQ8N187 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC22.32■■□□□ 1.16
CARFQ8N187 MIR6722-201ENST00000617286 78 ntBASIC22.32■■□□□ 1.16
CARFQ8N187 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CARFQ8N187 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CARFQ8N187 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC22.31■■□□□ 1.16
CARFQ8N187 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CARFQ8N187 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CARFQ8N187 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC22.31■■□□□ 1.16
CARFQ8N187 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC22.31■■□□□ 1.16
CARFQ8N187 CLTA-210ENST00000540080 989 ntTSL 2 BASIC22.31■■□□□ 1.16
CARFQ8N187 SNX5-217ENST00000606557 1087 ntBASIC22.31■■□□□ 1.16
CARFQ8N187 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC22.31■■□□□ 1.16
CARFQ8N187 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC22.31■■□□□ 1.16
CARFQ8N187 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
CARFQ8N187 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CARFQ8N187 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC22.3■■□□□ 1.16
CARFQ8N187 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC22.3■■□□□ 1.16
CARFQ8N187 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CARFQ8N187 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CARFQ8N187 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
CARFQ8N187 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
CARFQ8N187 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CARFQ8N187 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CARFQ8N187 CEBPA-AS1-201ENST00000592982 2198 ntBASIC22.29■■□□□ 1.16
CARFQ8N187 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
CARFQ8N187 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.29■■□□□ 1.16
CARFQ8N187 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
CARFQ8N187 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
CARFQ8N187 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.28■■□□□ 1.16
CARFQ8N187 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CARFQ8N187 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC22.28■■□□□ 1.16
CARFQ8N187 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC22.28■■□□□ 1.16
CARFQ8N187 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC22.28■■□□□ 1.16
CARFQ8N187 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC22.28■■□□□ 1.16
CARFQ8N187 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC22.28■■□□□ 1.16
CARFQ8N187 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22.27■■□□□ 1.16
CARFQ8N187 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC22.27■■□□□ 1.16
CARFQ8N187 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.27■■□□□ 1.16
CARFQ8N187 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC22.27■■□□□ 1.16
CARFQ8N187 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC22.27■■□□□ 1.16
CARFQ8N187 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC22.27■■□□□ 1.16
CARFQ8N187 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CARFQ8N187 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC22.26■■□□□ 1.15
CARFQ8N187 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CARFQ8N187 LSM4-201ENST00000252816 986 ntTSL 2 BASIC22.26■■□□□ 1.15
CARFQ8N187 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CARFQ8N187 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CARFQ8N187 AC004448.1-201ENST00000458332 883 ntBASIC22.25■■□□□ 1.15
CARFQ8N187 MIR3621-201ENST00000580529 85 ntBASIC22.25■■□□□ 1.15
CARFQ8N187 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC22.25■■□□□ 1.15
CARFQ8N187 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC22.25■■□□□ 1.15
CARFQ8N187 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC22.25■■□□□ 1.15
CARFQ8N187 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CARFQ8N187 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CARFQ8N187 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CARFQ8N187 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC22.25■■□□□ 1.15
CARFQ8N187 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC22.24■■□□□ 1.15
CARFQ8N187 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC22.24■■□□□ 1.15
CARFQ8N187 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CARFQ8N187 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC22.24■■□□□ 1.15
CARFQ8N187 AL117332.1-201ENST00000622628 974 ntBASIC22.24■■□□□ 1.15
CARFQ8N187 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC22.24■■□□□ 1.15
CARFQ8N187 CREM-210ENST00000374721 2020 ntTSL 5 BASIC22.24■■□□□ 1.15
CARFQ8N187 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC22.24■■□□□ 1.15
CARFQ8N187 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC22.24■■□□□ 1.15
CARFQ8N187 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
CARFQ8N187 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CARFQ8N187 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CARFQ8N187 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CARFQ8N187 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CARFQ8N187 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CARFQ8N187 AL356740.2-201ENST00000601559 647 ntBASIC22.23■■□□□ 1.15
CARFQ8N187 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
CARFQ8N187 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CARFQ8N187 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CARFQ8N187 TFPT-201ENST00000391757 774 ntTSL 5 BASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms