Protein–RNA interactions for Protein: Q6NSI3

FAM53A, Protein FAM53A, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53AQ6NSI3 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
FAM53AQ6NSI3 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
FAM53AQ6NSI3 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.29■□□□□ 0.68
FAM53AQ6NSI3 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
FAM53AQ6NSI3 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
FAM53AQ6NSI3 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FAM53AQ6NSI3 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FAM53AQ6NSI3 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
FAM53AQ6NSI3 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.29■□□□□ 0.68
FAM53AQ6NSI3 DUX4L18-201ENST00000553347 1267 ntBASIC19.29■□□□□ 0.68
FAM53AQ6NSI3 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.29■□□□□ 0.68
FAM53AQ6NSI3 MIR6765-201ENST00000614092 87 ntBASIC19.29■□□□□ 0.68
FAM53AQ6NSI3 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
FAM53AQ6NSI3 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
FAM53AQ6NSI3 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.29■□□□□ 0.68
FAM53AQ6NSI3 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
FAM53AQ6NSI3 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FAM53AQ6NSI3 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.28■□□□□ 0.68
FAM53AQ6NSI3 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
FAM53AQ6NSI3 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FAM53AQ6NSI3 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FAM53AQ6NSI3 AC004812.2-201ENST00000611079 2094 ntBASIC19.28■□□□□ 0.68
FAM53AQ6NSI3 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FAM53AQ6NSI3 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
FAM53AQ6NSI3 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.28■□□□□ 0.68
FAM53AQ6NSI3 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
FAM53AQ6NSI3 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FAM53AQ6NSI3 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FAM53AQ6NSI3 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
FAM53AQ6NSI3 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
FAM53AQ6NSI3 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
FAM53AQ6NSI3 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
FAM53AQ6NSI3 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
FAM53AQ6NSI3 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
FAM53AQ6NSI3 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
FAM53AQ6NSI3 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.27■□□□□ 0.68
FAM53AQ6NSI3 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
FAM53AQ6NSI3 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.27■□□□□ 0.68
FAM53AQ6NSI3 ABHD17AP5-201ENST00000580133 923 ntBASIC19.27■□□□□ 0.68
FAM53AQ6NSI3 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
FAM53AQ6NSI3 LINC00543-201ENST00000567234 1845 ntBASIC19.27■□□□□ 0.68
FAM53AQ6NSI3 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.27■□□□□ 0.68
FAM53AQ6NSI3 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
FAM53AQ6NSI3 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
FAM53AQ6NSI3 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FAM53AQ6NSI3 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FAM53AQ6NSI3 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.26■□□□□ 0.67
FAM53AQ6NSI3 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.26■□□□□ 0.67
FAM53AQ6NSI3 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
FAM53AQ6NSI3 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
FAM53AQ6NSI3 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.26■□□□□ 0.67
FAM53AQ6NSI3 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.26■□□□□ 0.67
FAM53AQ6NSI3 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.26■□□□□ 0.67
FAM53AQ6NSI3 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
FAM53AQ6NSI3 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
FAM53AQ6NSI3 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
FAM53AQ6NSI3 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.26■□□□□ 0.67
FAM53AQ6NSI3 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
FAM53AQ6NSI3 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
FAM53AQ6NSI3 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FAM53AQ6NSI3 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.25■□□□□ 0.67
FAM53AQ6NSI3 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
FAM53AQ6NSI3 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.25■□□□□ 0.67
FAM53AQ6NSI3 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
FAM53AQ6NSI3 AC087393.1-201ENST00000582896 145 ntBASIC19.25■□□□□ 0.67
FAM53AQ6NSI3 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
FAM53AQ6NSI3 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
FAM53AQ6NSI3 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.25■□□□□ 0.67
FAM53AQ6NSI3 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
FAM53AQ6NSI3 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.25■□□□□ 0.67
FAM53AQ6NSI3 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.24■□□□□ 0.67
FAM53AQ6NSI3 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
FAM53AQ6NSI3 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.24■□□□□ 0.67
FAM53AQ6NSI3 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.24■□□□□ 0.67
FAM53AQ6NSI3 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
FAM53AQ6NSI3 NTF6A-201ENST00000591175 560 ntBASIC19.24■□□□□ 0.67
FAM53AQ6NSI3 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
FAM53AQ6NSI3 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FAM53AQ6NSI3 ABCB10P4-201ENST00000566803 2184 ntBASIC19.24■□□□□ 0.67
FAM53AQ6NSI3 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FAM53AQ6NSI3 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
FAM53AQ6NSI3 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.24■□□□□ 0.67
FAM53AQ6NSI3 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FAM53AQ6NSI3 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FAM53AQ6NSI3 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FAM53AQ6NSI3 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
FAM53AQ6NSI3 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
FAM53AQ6NSI3 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
FAM53AQ6NSI3 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
FAM53AQ6NSI3 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FAM53AQ6NSI3 KRT18P10-201ENST00000388836 1287 ntBASIC19.23■□□□□ 0.67
FAM53AQ6NSI3 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
FAM53AQ6NSI3 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FAM53AQ6NSI3 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FAM53AQ6NSI3 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FAM53AQ6NSI3 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
FAM53AQ6NSI3 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
FAM53AQ6NSI3 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
FAM53AQ6NSI3 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FAM53AQ6NSI3 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms