Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SNAI3Q3KNW1 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.25■□□□□ 0.83
SNAI3Q3KNW1 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.25■□□□□ 0.83
SNAI3Q3KNW1 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
SNAI3Q3KNW1 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SNAI3Q3KNW1 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SNAI3Q3KNW1 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.25■□□□□ 0.83
SNAI3Q3KNW1 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.24■□□□□ 0.83
SNAI3Q3KNW1 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNAI3Q3KNW1 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNAI3Q3KNW1 AC004987.1-201ENST00000428627 508 ntBASIC20.24■□□□□ 0.83
SNAI3Q3KNW1 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.24■□□□□ 0.83
SNAI3Q3KNW1 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SNAI3Q3KNW1 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.24■□□□□ 0.83
SNAI3Q3KNW1 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SNAI3Q3KNW1 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNAI3Q3KNW1 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.24■□□□□ 0.83
SNAI3Q3KNW1 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNAI3Q3KNW1 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.24■□□□□ 0.83
SNAI3Q3KNW1 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.23■□□□□ 0.83
SNAI3Q3KNW1 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
SNAI3Q3KNW1 AL592295.1-201ENST00000400984 884 ntBASIC20.23■□□□□ 0.83
SNAI3Q3KNW1 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.23■□□□□ 0.83
SNAI3Q3KNW1 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SNAI3Q3KNW1 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SNAI3Q3KNW1 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SNAI3Q3KNW1 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.23■□□□□ 0.83
SNAI3Q3KNW1 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
SNAI3Q3KNW1 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SNAI3Q3KNW1 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SNAI3Q3KNW1 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.22■□□□□ 0.83
SNAI3Q3KNW1 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SNAI3Q3KNW1 ATP5G2P3-201ENST00000429083 425 ntBASIC20.22■□□□□ 0.83
SNAI3Q3KNW1 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SNAI3Q3KNW1 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.22■□□□□ 0.83
SNAI3Q3KNW1 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.22■□□□□ 0.83
SNAI3Q3KNW1 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNAI3Q3KNW1 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
SNAI3Q3KNW1 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.21■□□□□ 0.83
SNAI3Q3KNW1 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.21■□□□□ 0.83
SNAI3Q3KNW1 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SNAI3Q3KNW1 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNAI3Q3KNW1 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNAI3Q3KNW1 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNAI3Q3KNW1 AC139795.1-202ENST00000500444 432 ntBASIC20.21■□□□□ 0.83
SNAI3Q3KNW1 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNAI3Q3KNW1 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNAI3Q3KNW1 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SNAI3Q3KNW1 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SNAI3Q3KNW1 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SNAI3Q3KNW1 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.21■□□□□ 0.83
SNAI3Q3KNW1 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SNAI3Q3KNW1 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNAI3Q3KNW1 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SNAI3Q3KNW1 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.2■□□□□ 0.82
SNAI3Q3KNW1 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNAI3Q3KNW1 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNAI3Q3KNW1 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.2■□□□□ 0.82
SNAI3Q3KNW1 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.2■□□□□ 0.82
SNAI3Q3KNW1 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
SNAI3Q3KNW1 AC141586.4-201ENST00000624558 1573 ntBASIC20.2■□□□□ 0.82
SNAI3Q3KNW1 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.19■□□□□ 0.82
SNAI3Q3KNW1 AC090877.2-201ENST00000558441 1738 ntBASIC20.19■□□□□ 0.82
SNAI3Q3KNW1 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SNAI3Q3KNW1 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SNAI3Q3KNW1 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SNAI3Q3KNW1 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
SNAI3Q3KNW1 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNAI3Q3KNW1 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
SNAI3Q3KNW1 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNAI3Q3KNW1 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNAI3Q3KNW1 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.18■□□□□ 0.82
SNAI3Q3KNW1 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SNAI3Q3KNW1 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.18■□□□□ 0.82
SNAI3Q3KNW1 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNAI3Q3KNW1 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNAI3Q3KNW1 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNAI3Q3KNW1 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNAI3Q3KNW1 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SNAI3Q3KNW1 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SNAI3Q3KNW1 AC004812.2-201ENST00000611079 2094 ntBASIC20.17■□□□□ 0.82
SNAI3Q3KNW1 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SNAI3Q3KNW1 TSPY13P-201ENST00000338964 914 ntBASIC20.17■□□□□ 0.82
SNAI3Q3KNW1 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SNAI3Q3KNW1 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
SNAI3Q3KNW1 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SNAI3Q3KNW1 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.17■□□□□ 0.82
SNAI3Q3KNW1 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SNAI3Q3KNW1 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
SNAI3Q3KNW1 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SNAI3Q3KNW1 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SNAI3Q3KNW1 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SNAI3Q3KNW1 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.16■□□□□ 0.82
SNAI3Q3KNW1 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNAI3Q3KNW1 BHLHE23-202ENST00000612929 1109 ntBASIC20.16■□□□□ 0.82
SNAI3Q3KNW1 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.16■□□□□ 0.82
SNAI3Q3KNW1 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNAI3Q3KNW1 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNAI3Q3KNW1 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SNAI3Q3KNW1 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms