Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDC42P60953 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDC42P60953 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.25■□□□□ 0.99
CDC42P60953 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDC42P60953 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDC42P60953 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDC42P60953 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDC42P60953 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.24■□□□□ 0.99
CDC42P60953 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CDC42P60953 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDC42P60953 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDC42P60953 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDC42P60953 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDC42P60953 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDC42P60953 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDC42P60953 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CDC42P60953 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.22■□□□□ 0.99
CDC42P60953 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDC42P60953 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.22■□□□□ 0.99
CDC42P60953 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDC42P60953 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDC42P60953 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.22■□□□□ 0.99
CDC42P60953 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDC42P60953 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.22■□□□□ 0.99
CDC42P60953 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.22■□□□□ 0.99
CDC42P60953 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CDC42P60953 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CDC42P60953 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CDC42P60953 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CDC42P60953 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
CDC42P60953 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDC42P60953 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDC42P60953 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDC42P60953 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDC42P60953 HLA-L-211ENST00000482052 1765 ntBASIC21.2■□□□□ 0.99
CDC42P60953 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
CDC42P60953 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.2■□□□□ 0.98
CDC42P60953 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.2■□□□□ 0.98
CDC42P60953 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDC42P60953 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
CDC42P60953 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDC42P60953 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CDC42P60953 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDC42P60953 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CDC42P60953 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDC42P60953 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CDC42P60953 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
CDC42P60953 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CDC42P60953 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
CDC42P60953 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDC42P60953 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CDC42P60953 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDC42P60953 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDC42P60953 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDC42P60953 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDC42P60953 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.19■□□□□ 0.98
CDC42P60953 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.19■□□□□ 0.98
CDC42P60953 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
CDC42P60953 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CDC42P60953 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDC42P60953 C9orf163-202ENST00000624034 2573 ntBASIC21.19■□□□□ 0.98
CDC42P60953 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CDC42P60953 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDC42P60953 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDC42P60953 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.18■□□□□ 0.98
CDC42P60953 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDC42P60953 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.18■□□□□ 0.98
CDC42P60953 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDC42P60953 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDC42P60953 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDC42P60953 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CDC42P60953 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDC42P60953 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDC42P60953 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDC42P60953 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDC42P60953 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CDC42P60953 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
CDC42P60953 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CDC42P60953 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDC42P60953 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDC42P60953 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDC42P60953 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDC42P60953 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.16■□□□□ 0.98
CDC42P60953 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDC42P60953 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDC42P60953 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.16■□□□□ 0.98
CDC42P60953 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.16■□□□□ 0.98
CDC42P60953 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDC42P60953 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDC42P60953 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.16■□□□□ 0.98
CDC42P60953 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.16■□□□□ 0.98
CDC42P60953 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDC42P60953 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDC42P60953 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDC42P60953 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.16■□□□□ 0.98
CDC42P60953 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CDC42P60953 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDC42P60953 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.15■□□□□ 0.98
CDC42P60953 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
CDC42P60953 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms