Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.46■■□□□ 1.03
SMIM11AP58511 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.46■■□□□ 1.03
SMIM11AP58511 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
SMIM11AP58511 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.45■■□□□ 1.02
SMIM11AP58511 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.45■■□□□ 1.02
SMIM11AP58511 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SMIM11AP58511 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
SMIM11AP58511 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.44■■□□□ 1.02
SMIM11AP58511 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SMIM11AP58511 HLA-L-211ENST00000482052 1765 ntBASIC21.44■■□□□ 1.02
SMIM11AP58511 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SMIM11AP58511 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
SMIM11AP58511 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SMIM11AP58511 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SMIM11AP58511 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.44■■□□□ 1.02
SMIM11AP58511 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SMIM11AP58511 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SMIM11AP58511 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
SMIM11AP58511 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.43■■□□□ 1.02
SMIM11AP58511 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.43■■□□□ 1.02
SMIM11AP58511 AC022413.1-201ENST00000624602 984 ntBASIC21.43■■□□□ 1.02
SMIM11AP58511 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.43■■□□□ 1.02
SMIM11AP58511 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SMIM11AP58511 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SMIM11AP58511 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SMIM11AP58511 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
SMIM11AP58511 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SMIM11AP58511 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SMIM11AP58511 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SMIM11AP58511 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SMIM11AP58511 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SMIM11AP58511 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SMIM11AP58511 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
SMIM11AP58511 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.41■■□□□ 1.02
SMIM11AP58511 FOXO3B-201ENST00000395675 1928 ntBASIC21.41■■□□□ 1.02
SMIM11AP58511 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.41■■□□□ 1.02
SMIM11AP58511 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
SMIM11AP58511 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SMIM11AP58511 AC068473.5-201ENST00000616428 2072 ntBASIC21.4■■□□□ 1.02
SMIM11AP58511 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
SMIM11AP58511 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
SMIM11AP58511 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.4■■□□□ 1.02
SMIM11AP58511 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.4■■□□□ 1.02
SMIM11AP58511 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
SMIM11AP58511 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
SMIM11AP58511 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.4■■□□□ 1.02
SMIM11AP58511 ABCB10P4-201ENST00000566803 2184 ntBASIC21.4■■□□□ 1.02
SMIM11AP58511 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.4■■□□□ 1.02
SMIM11AP58511 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.39■■□□□ 1.01
SMIM11AP58511 AC007029.1-201ENST00000604183 313 ntBASIC21.39■■□□□ 1.01
SMIM11AP58511 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SMIM11AP58511 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SMIM11AP58511 AC133561.1-201ENST00000568600 2415 ntBASIC21.39■■□□□ 1.01
SMIM11AP58511 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.39■■□□□ 1.01
SMIM11AP58511 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SMIM11AP58511 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.38■■□□□ 1.01
SMIM11AP58511 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SMIM11AP58511 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SMIM11AP58511 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.38■■□□□ 1.01
SMIM11AP58511 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SMIM11AP58511 MIR639-201ENST00000384974 98 ntBASIC21.38■■□□□ 1.01
SMIM11AP58511 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.38■■□□□ 1.01
SMIM11AP58511 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.38■■□□□ 1.01
SMIM11AP58511 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SMIM11AP58511 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SMIM11AP58511 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
SMIM11AP58511 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SMIM11AP58511 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SMIM11AP58511 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SMIM11AP58511 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SMIM11AP58511 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.37■■□□□ 1.01
SMIM11AP58511 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
SMIM11AP58511 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
SMIM11AP58511 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
SMIM11AP58511 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
SMIM11AP58511 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.36■■□□□ 1.01
SMIM11AP58511 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
SMIM11AP58511 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.35■■□□□ 1.01
SMIM11AP58511 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SMIM11AP58511 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
SMIM11AP58511 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.35■■□□□ 1.01
SMIM11AP58511 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SMIM11AP58511 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
SMIM11AP58511 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.35■■□□□ 1.01
SMIM11AP58511 RAP2CP1-202ENST00000605179 643 ntBASIC21.35■■□□□ 1.01
SMIM11AP58511 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.35■■□□□ 1.01
SMIM11AP58511 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SMIM11AP58511 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SMIM11AP58511 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.35■■□□□ 1.01
SMIM11AP58511 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
SMIM11AP58511 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SMIM11AP58511 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.34■■□□□ 1.01
SMIM11AP58511 MIR7108-201ENST00000614319 87 ntBASIC21.34■■□□□ 1.01
SMIM11AP58511 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.34■■□□□ 1.01
SMIM11AP58511 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SMIM11AP58511 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SMIM11AP58511 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.34■■□□□ 1.01
SMIM11AP58511 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SMIM11AP58511 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SMIM11AP58511 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms