Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNOT4O95628 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
CNOT4O95628 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CNOT4O95628 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CNOT4O95628 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CNOT4O95628 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.67■□□□□ 0.9
CNOT4O95628 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.67■□□□□ 0.9
CNOT4O95628 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CNOT4O95628 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.67■□□□□ 0.9
CNOT4O95628 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CNOT4O95628 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CNOT4O95628 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CNOT4O95628 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.66■□□□□ 0.9
CNOT4O95628 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNOT4O95628 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CNOT4O95628 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.66■□□□□ 0.9
CNOT4O95628 AL356441.2-201ENST00000443009 864 ntBASIC20.66■□□□□ 0.9
CNOT4O95628 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.66■□□□□ 0.9
CNOT4O95628 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNOT4O95628 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.66■□□□□ 0.9
CNOT4O95628 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNOT4O95628 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CNOT4O95628 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CNOT4O95628 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CNOT4O95628 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNOT4O95628 KRT125P-201ENST00000546827 989 ntBASIC20.65■□□□□ 0.9
CNOT4O95628 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.65■□□□□ 0.9
CNOT4O95628 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNOT4O95628 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNOT4O95628 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CNOT4O95628 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNOT4O95628 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.64■□□□□ 0.89
CNOT4O95628 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNOT4O95628 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNOT4O95628 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNOT4O95628 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CNOT4O95628 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.63■□□□□ 0.89
CNOT4O95628 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.63■□□□□ 0.89
CNOT4O95628 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CNOT4O95628 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNOT4O95628 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.62■□□□□ 0.89
CNOT4O95628 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNOT4O95628 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNOT4O95628 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.62■□□□□ 0.89
CNOT4O95628 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.62■□□□□ 0.89
CNOT4O95628 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CNOT4O95628 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.62■□□□□ 0.89
CNOT4O95628 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.62■□□□□ 0.89
CNOT4O95628 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNOT4O95628 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CNOT4O95628 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNOT4O95628 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.62■□□□□ 0.89
CNOT4O95628 SLC6A10P-202ENST00000431994 2058 ntBASIC20.62■□□□□ 0.89
CNOT4O95628 AC021242.3-201ENST00000607598 1377 ntBASIC20.61■□□□□ 0.89
CNOT4O95628 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.61■□□□□ 0.89
CNOT4O95628 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNOT4O95628 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNOT4O95628 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.61■□□□□ 0.89
CNOT4O95628 AC239859.2-201ENST00000444165 318 ntBASIC20.61■□□□□ 0.89
CNOT4O95628 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.61■□□□□ 0.89
CNOT4O95628 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
CNOT4O95628 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CNOT4O95628 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CNOT4O95628 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNOT4O95628 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNOT4O95628 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CNOT4O95628 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CNOT4O95628 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CNOT4O95628 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CNOT4O95628 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CNOT4O95628 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.6■□□□□ 0.89
CNOT4O95628 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNOT4O95628 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CNOT4O95628 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CNOT4O95628 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNOT4O95628 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.59■□□□□ 0.89
CNOT4O95628 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.59■□□□□ 0.89
CNOT4O95628 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
CNOT4O95628 MIR6089-201ENST00000616698 64 ntBASIC20.59■□□□□ 0.89
CNOT4O95628 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CNOT4O95628 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNOT4O95628 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.58■□□□□ 0.89
CNOT4O95628 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CNOT4O95628 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
CNOT4O95628 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.58■□□□□ 0.89
CNOT4O95628 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.58■□□□□ 0.88
CNOT4O95628 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.58■□□□□ 0.88
CNOT4O95628 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CNOT4O95628 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CNOT4O95628 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CNOT4O95628 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CNOT4O95628 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNOT4O95628 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CNOT4O95628 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CNOT4O95628 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CNOT4O95628 MIR4787-201ENST00000607364 84 ntBASIC20.56■□□□□ 0.88
CNOT4O95628 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.56■□□□□ 0.88
CNOT4O95628 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CNOT4O95628 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.56■□□□□ 0.88
CNOT4O95628 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms