Protein–RNA interactions for Protein: A0A0J9YX44

TRBV5-5, T-cell receptor beta variable 5-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-5A0A0J9YX44 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRBV5-5A0A0J9YX44 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRBV5-5A0A0J9YX44 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
TRBV5-5A0A0J9YX44 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.32■□□□□ 0.84
TRBV5-5A0A0J9YX44 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRBV5-5A0A0J9YX44 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.31■□□□□ 0.84
TRBV5-5A0A0J9YX44 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRBV5-5A0A0J9YX44 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
TRBV5-5A0A0J9YX44 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRBV5-5A0A0J9YX44 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.3■□□□□ 0.84
TRBV5-5A0A0J9YX44 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRBV5-5A0A0J9YX44 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRBV5-5A0A0J9YX44 AC079834.2-201ENST00000609776 1949 ntBASIC20.3■□□□□ 0.84
TRBV5-5A0A0J9YX44 RP9P-202ENST00000450133 1212 ntBASIC20.3■□□□□ 0.84
TRBV5-5A0A0J9YX44 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRBV5-5A0A0J9YX44 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRBV5-5A0A0J9YX44 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
TRBV5-5A0A0J9YX44 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRBV5-5A0A0J9YX44 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRBV5-5A0A0J9YX44 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRBV5-5A0A0J9YX44 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRBV5-5A0A0J9YX44 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.29■□□□□ 0.84
TRBV5-5A0A0J9YX44 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRBV5-5A0A0J9YX44 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.29■□□□□ 0.84
TRBV5-5A0A0J9YX44 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRBV5-5A0A0J9YX44 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
TRBV5-5A0A0J9YX44 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRBV5-5A0A0J9YX44 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRBV5-5A0A0J9YX44 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRBV5-5A0A0J9YX44 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRBV5-5A0A0J9YX44 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRBV5-5A0A0J9YX44 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRBV5-5A0A0J9YX44 FOXO3B-201ENST00000395675 1928 ntBASIC20.28■□□□□ 0.84
TRBV5-5A0A0J9YX44 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
TRBV5-5A0A0J9YX44 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRBV5-5A0A0J9YX44 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRBV5-5A0A0J9YX44 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
TRBV5-5A0A0J9YX44 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.28■□□□□ 0.84
TRBV5-5A0A0J9YX44 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRBV5-5A0A0J9YX44 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRBV5-5A0A0J9YX44 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRBV5-5A0A0J9YX44 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRBV5-5A0A0J9YX44 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRBV5-5A0A0J9YX44 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRBV5-5A0A0J9YX44 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.27■□□□□ 0.84
TRBV5-5A0A0J9YX44 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TRBV5-5A0A0J9YX44 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
TRBV5-5A0A0J9YX44 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRBV5-5A0A0J9YX44 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRBV5-5A0A0J9YX44 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRBV5-5A0A0J9YX44 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRBV5-5A0A0J9YX44 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRBV5-5A0A0J9YX44 ECEL1P2-201ENST00000461596 1295 ntBASIC20.27■□□□□ 0.84
TRBV5-5A0A0J9YX44 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRBV5-5A0A0J9YX44 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRBV5-5A0A0J9YX44 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRBV5-5A0A0J9YX44 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRBV5-5A0A0J9YX44 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRBV5-5A0A0J9YX44 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRBV5-5A0A0J9YX44 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.27■□□□□ 0.83
TRBV5-5A0A0J9YX44 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRBV5-5A0A0J9YX44 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
TRBV5-5A0A0J9YX44 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.26■□□□□ 0.83
TRBV5-5A0A0J9YX44 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRBV5-5A0A0J9YX44 AC093536.1-201ENST00000569153 554 ntBASIC20.26■□□□□ 0.83
TRBV5-5A0A0J9YX44 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRBV5-5A0A0J9YX44 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
TRBV5-5A0A0J9YX44 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRBV5-5A0A0J9YX44 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
TRBV5-5A0A0J9YX44 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRBV5-5A0A0J9YX44 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.25■□□□□ 0.83
TRBV5-5A0A0J9YX44 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.25■□□□□ 0.83
TRBV5-5A0A0J9YX44 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRBV5-5A0A0J9YX44 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRBV5-5A0A0J9YX44 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TRBV5-5A0A0J9YX44 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRBV5-5A0A0J9YX44 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.24■□□□□ 0.83
TRBV5-5A0A0J9YX44 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRBV5-5A0A0J9YX44 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.24■□□□□ 0.83
TRBV5-5A0A0J9YX44 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.23■□□□□ 0.83
TRBV5-5A0A0J9YX44 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRBV5-5A0A0J9YX44 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.23■□□□□ 0.83
TRBV5-5A0A0J9YX44 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
TRBV5-5A0A0J9YX44 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.22■□□□□ 0.83
TRBV5-5A0A0J9YX44 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.22■□□□□ 0.83
TRBV5-5A0A0J9YX44 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.22■□□□□ 0.83
TRBV5-5A0A0J9YX44 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.22■□□□□ 0.83
TRBV5-5A0A0J9YX44 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
TRBV5-5A0A0J9YX44 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRBV5-5A0A0J9YX44 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.22■□□□□ 0.83
TRBV5-5A0A0J9YX44 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRBV5-5A0A0J9YX44 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRBV5-5A0A0J9YX44 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
TRBV5-5A0A0J9YX44 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
TRBV5-5A0A0J9YX44 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRBV5-5A0A0J9YX44 C9orf163-202ENST00000624034 2573 ntBASIC20.21■□□□□ 0.83
TRBV5-5A0A0J9YX44 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRBV5-5A0A0J9YX44 KRT18P10-201ENST00000388836 1287 ntBASIC20.21■□□□□ 0.83
TRBV5-5A0A0J9YX44 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRBV5-5A0A0J9YX44 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms