Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CSNK1G3Q9Y6M4 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CSNK1G3Q9Y6M4 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CSNK1G3Q9Y6M4 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CSNK1G3Q9Y6M4 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC23.03■■□□□ 1.28
CSNK1G3Q9Y6M4 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC23.03■■□□□ 1.28
CSNK1G3Q9Y6M4 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.03■■□□□ 1.28
CSNK1G3Q9Y6M4 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CSNK1G3Q9Y6M4 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CSNK1G3Q9Y6M4 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CSNK1G3Q9Y6M4 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.02■■□□□ 1.28
CSNK1G3Q9Y6M4 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CSNK1G3Q9Y6M4 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
CSNK1G3Q9Y6M4 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.02■■□□□ 1.28
CSNK1G3Q9Y6M4 MIR3621-201ENST00000580529 85 ntBASIC23.02■■□□□ 1.28
CSNK1G3Q9Y6M4 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.02■■□□□ 1.28
CSNK1G3Q9Y6M4 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CSNK1G3Q9Y6M4 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CSNK1G3Q9Y6M4 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
CSNK1G3Q9Y6M4 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CSNK1G3Q9Y6M4 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC23.01■■□□□ 1.27
CSNK1G3Q9Y6M4 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CSNK1G3Q9Y6M4 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CSNK1G3Q9Y6M4 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.01■■□□□ 1.27
CSNK1G3Q9Y6M4 AL117332.1-201ENST00000622628 974 ntBASIC23.01■■□□□ 1.27
CSNK1G3Q9Y6M4 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.01■■□□□ 1.27
CSNK1G3Q9Y6M4 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.01■■□□□ 1.27
CSNK1G3Q9Y6M4 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC23■■□□□ 1.27
CSNK1G3Q9Y6M4 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
CSNK1G3Q9Y6M4 AC131281.2-201ENST00000520478 145 ntBASIC23■■□□□ 1.27
CSNK1G3Q9Y6M4 AF131216.4-201ENST00000638924 1588 ntBASIC23■■□□□ 1.27
CSNK1G3Q9Y6M4 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
CSNK1G3Q9Y6M4 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
CSNK1G3Q9Y6M4 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
CSNK1G3Q9Y6M4 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CSNK1G3Q9Y6M4 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
CSNK1G3Q9Y6M4 LSM4-201ENST00000252816 986 ntTSL 2 BASIC22.99■■□□□ 1.27
CSNK1G3Q9Y6M4 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CSNK1G3Q9Y6M4 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC22.99■■□□□ 1.27
CSNK1G3Q9Y6M4 TRIR-202ENST00000588213 841 ntTSL 3 BASIC22.99■■□□□ 1.27
CSNK1G3Q9Y6M4 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CSNK1G3Q9Y6M4 AL356740.2-201ENST00000601559 647 ntBASIC22.99■■□□□ 1.27
CSNK1G3Q9Y6M4 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
CSNK1G3Q9Y6M4 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CSNK1G3Q9Y6M4 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC22.99■■□□□ 1.27
CSNK1G3Q9Y6M4 CREM-210ENST00000374721 2020 ntTSL 5 BASIC22.99■■□□□ 1.27
CSNK1G3Q9Y6M4 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
CSNK1G3Q9Y6M4 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CSNK1G3Q9Y6M4 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CSNK1G3Q9Y6M4 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC22.98■■□□□ 1.27
CSNK1G3Q9Y6M4 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CSNK1G3Q9Y6M4 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
CSNK1G3Q9Y6M4 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CSNK1G3Q9Y6M4 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC22.98■■□□□ 1.27
CSNK1G3Q9Y6M4 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC22.98■■□□□ 1.27
CSNK1G3Q9Y6M4 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CSNK1G3Q9Y6M4 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CSNK1G3Q9Y6M4 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CSNK1G3Q9Y6M4 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CSNK1G3Q9Y6M4 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC22.97■■□□□ 1.27
CSNK1G3Q9Y6M4 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC22.97■■□□□ 1.27
CSNK1G3Q9Y6M4 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CSNK1G3Q9Y6M4 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CSNK1G3Q9Y6M4 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CSNK1G3Q9Y6M4 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CSNK1G3Q9Y6M4 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC22.96■■□□□ 1.27
CSNK1G3Q9Y6M4 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CSNK1G3Q9Y6M4 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC22.96■■□□□ 1.27
CSNK1G3Q9Y6M4 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC22.96■■□□□ 1.27
CSNK1G3Q9Y6M4 CLTA-210ENST00000540080 989 ntTSL 2 BASIC22.96■■□□□ 1.27
CSNK1G3Q9Y6M4 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CSNK1G3Q9Y6M4 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC22.96■■□□□ 1.27
CSNK1G3Q9Y6M4 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
CSNK1G3Q9Y6M4 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC22.95■■□□□ 1.26
CSNK1G3Q9Y6M4 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CSNK1G3Q9Y6M4 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC22.95■■□□□ 1.26
CSNK1G3Q9Y6M4 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC22.95■■□□□ 1.26
CSNK1G3Q9Y6M4 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC22.95■■□□□ 1.26
CSNK1G3Q9Y6M4 AC090877.2-201ENST00000558441 1738 ntBASIC22.95■■□□□ 1.26
CSNK1G3Q9Y6M4 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
CSNK1G3Q9Y6M4 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CSNK1G3Q9Y6M4 AC097639.1-201ENST00000565519 1891 ntBASIC22.94■■□□□ 1.26
CSNK1G3Q9Y6M4 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CSNK1G3Q9Y6M4 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CSNK1G3Q9Y6M4 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CSNK1G3Q9Y6M4 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC22.94■■□□□ 1.26
CSNK1G3Q9Y6M4 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CSNK1G3Q9Y6M4 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CSNK1G3Q9Y6M4 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CSNK1G3Q9Y6M4 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CSNK1G3Q9Y6M4 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
CSNK1G3Q9Y6M4 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CSNK1G3Q9Y6M4 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
CSNK1G3Q9Y6M4 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CSNK1G3Q9Y6M4 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC22.92■■□□□ 1.26
CSNK1G3Q9Y6M4 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
CSNK1G3Q9Y6M4 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CSNK1G3Q9Y6M4 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CSNK1G3Q9Y6M4 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC22.92■■□□□ 1.26
CSNK1G3Q9Y6M4 AL136116.3-201ENST00000402907 1138 ntBASIC22.92■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms