Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC24.9■■□□□ 1.58
PCDHGC3Q9UN70 EED-207ENST00000528180 1745 ntTSL 5 BASIC24.89■■□□□ 1.58
PCDHGC3Q9UN70 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC24.89■■□□□ 1.58
PCDHGC3Q9UN70 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
PCDHGC3Q9UN70 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.58
PCDHGC3Q9UN70 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC24.89■■□□□ 1.58
PCDHGC3Q9UN70 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
PCDHGC3Q9UN70 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
PCDHGC3Q9UN70 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
PCDHGC3Q9UN70 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC24.89■■□□□ 1.57
PCDHGC3Q9UN70 AL139125.2-201ENST00000623134 1869 ntBASIC24.89■■□□□ 1.57
PCDHGC3Q9UN70 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.57
PCDHGC3Q9UN70 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHGC3Q9UN70 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC24.88■■□□□ 1.57
PCDHGC3Q9UN70 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
PCDHGC3Q9UN70 IDNK-201ENST00000376417 511 ntTSL 5 BASIC24.88■■□□□ 1.57
PCDHGC3Q9UN70 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHGC3Q9UN70 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC24.88■■□□□ 1.57
PCDHGC3Q9UN70 AL033527.3-201ENST00000566366 1196 ntBASIC24.88■■□□□ 1.57
PCDHGC3Q9UN70 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC24.88■■□□□ 1.57
PCDHGC3Q9UN70 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHGC3Q9UN70 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHGC3Q9UN70 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC24.88■■□□□ 1.57
PCDHGC3Q9UN70 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC24.87■■□□□ 1.57
PCDHGC3Q9UN70 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
PCDHGC3Q9UN70 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
PCDHGC3Q9UN70 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
PCDHGC3Q9UN70 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHGC3Q9UN70 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHGC3Q9UN70 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHGC3Q9UN70 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHGC3Q9UN70 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC24.86■■□□□ 1.57
PCDHGC3Q9UN70 SSSCA1-AS1-201ENST00000567594 614 ntBASIC24.86■■□□□ 1.57
PCDHGC3Q9UN70 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHGC3Q9UN70 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHGC3Q9UN70 BHLHE23-202ENST00000612929 1109 ntBASIC24.86■■□□□ 1.57
PCDHGC3Q9UN70 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC24.86■■□□□ 1.57
PCDHGC3Q9UN70 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC24.86■■□□□ 1.57
PCDHGC3Q9UN70 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
PCDHGC3Q9UN70 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHGC3Q9UN70 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
PCDHGC3Q9UN70 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHGC3Q9UN70 PVT1_1.1-201ENST00000615125 194 ntBASIC24.85■■□□□ 1.57
PCDHGC3Q9UN70 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHGC3Q9UN70 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHGC3Q9UN70 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHGC3Q9UN70 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
PCDHGC3Q9UN70 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC24.84■■□□□ 1.57
PCDHGC3Q9UN70 AC022616.5-201ENST00000518796 181 ntBASIC24.84■■□□□ 1.57
PCDHGC3Q9UN70 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC24.84■■□□□ 1.57
PCDHGC3Q9UN70 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
PCDHGC3Q9UN70 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC24.83■■□□□ 1.57
PCDHGC3Q9UN70 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC24.83■■□□□ 1.57
PCDHGC3Q9UN70 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.57
PCDHGC3Q9UN70 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
PCDHGC3Q9UN70 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
PCDHGC3Q9UN70 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
PCDHGC3Q9UN70 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC24.82■■□□□ 1.56
PCDHGC3Q9UN70 AC090877.2-201ENST00000558441 1738 ntBASIC24.82■■□□□ 1.56
PCDHGC3Q9UN70 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC24.82■■□□□ 1.56
PCDHGC3Q9UN70 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
PCDHGC3Q9UN70 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHGC3Q9UN70 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHGC3Q9UN70 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHGC3Q9UN70 BEX3-202ENST00000372634 753 ntTSL 2 BASIC24.81■■□□□ 1.56
PCDHGC3Q9UN70 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
PCDHGC3Q9UN70 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC24.81■■□□□ 1.56
PCDHGC3Q9UN70 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC24.81■■□□□ 1.56
PCDHGC3Q9UN70 AC010980.1-201ENST00000587192 1142 ntBASIC24.81■■□□□ 1.56
PCDHGC3Q9UN70 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHGC3Q9UN70 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHGC3Q9UN70 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC24.8■■□□□ 1.56
PCDHGC3Q9UN70 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PCDHGC3Q9UN70 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC24.8■■□□□ 1.56
PCDHGC3Q9UN70 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
PCDHGC3Q9UN70 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC24.8■■□□□ 1.56
PCDHGC3Q9UN70 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC24.8■■□□□ 1.56
PCDHGC3Q9UN70 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PCDHGC3Q9UN70 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
PCDHGC3Q9UN70 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
PCDHGC3Q9UN70 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PCDHGC3Q9UN70 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
PCDHGC3Q9UN70 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PCDHGC3Q9UN70 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC24.79■■□□□ 1.56
PCDHGC3Q9UN70 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PCDHGC3Q9UN70 PREB-202ENST00000406567 1910 ntTSL 5 BASIC24.78■■□□□ 1.56
PCDHGC3Q9UN70 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PCDHGC3Q9UN70 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC24.78■■□□□ 1.56
PCDHGC3Q9UN70 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
PCDHGC3Q9UN70 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC24.78■■□□□ 1.56
PCDHGC3Q9UN70 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC24.78■■□□□ 1.56
PCDHGC3Q9UN70 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHGC3Q9UN70 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHGC3Q9UN70 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHGC3Q9UN70 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHGC3Q9UN70 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC24.77■■□□□ 1.56
PCDHGC3Q9UN70 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
PCDHGC3Q9UN70 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC24.77■■□□□ 1.56
PCDHGC3Q9UN70 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC24.77■■□□□ 1.56
PCDHGC3Q9UN70 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms