Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
RNF216Q9NWF9 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RNF216Q9NWF9 AC131212.1-201ENST00000613771 668 ntBASIC26.29■■□□□ 1.8
RNF216Q9NWF9 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC26.29■■□□□ 1.8
RNF216Q9NWF9 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
RNF216Q9NWF9 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RNF216Q9NWF9 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RNF216Q9NWF9 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
RNF216Q9NWF9 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC26.28■■□□□ 1.8
RNF216Q9NWF9 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
RNF216Q9NWF9 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RNF216Q9NWF9 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RNF216Q9NWF9 SNAI3-AS1-204ENST00000567997 2048 ntBASIC26.27■■□□□ 1.8
RNF216Q9NWF9 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
RNF216Q9NWF9 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC26.27■■□□□ 1.8
RNF216Q9NWF9 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RNF216Q9NWF9 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC26.27■■□□□ 1.8
RNF216Q9NWF9 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC26.27■■□□□ 1.8
RNF216Q9NWF9 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
RNF216Q9NWF9 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
RNF216Q9NWF9 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
RNF216Q9NWF9 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC26.27■■□□□ 1.8
RNF216Q9NWF9 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
RNF216Q9NWF9 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC26.26■■□□□ 1.79
RNF216Q9NWF9 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC26.26■■□□□ 1.79
RNF216Q9NWF9 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
RNF216Q9NWF9 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC26.26■■□□□ 1.79
RNF216Q9NWF9 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RNF216Q9NWF9 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RNF216Q9NWF9 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
RNF216Q9NWF9 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC26.25■■□□□ 1.79
RNF216Q9NWF9 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
RNF216Q9NWF9 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC26.25■■□□□ 1.79
RNF216Q9NWF9 ETFRF1-205ENST00000555711 783 ntTSL 3 BASIC26.25■■□□□ 1.79
RNF216Q9NWF9 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
RNF216Q9NWF9 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC26.25■■□□□ 1.79
RNF216Q9NWF9 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC26.25■■□□□ 1.79
RNF216Q9NWF9 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RNF216Q9NWF9 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC26.24■■□□□ 1.79
RNF216Q9NWF9 AC239859.2-201ENST00000444165 318 ntBASIC26.24■■□□□ 1.79
RNF216Q9NWF9 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC26.24■■□□□ 1.79
RNF216Q9NWF9 THA1P-201ENST00000590384 1145 ntBASIC26.24■■□□□ 1.79
RNF216Q9NWF9 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC26.24■■□□□ 1.79
RNF216Q9NWF9 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
RNF216Q9NWF9 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RNF216Q9NWF9 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RNF216Q9NWF9 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC26.23■■□□□ 1.79
RNF216Q9NWF9 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
RNF216Q9NWF9 AL592295.1-201ENST00000400984 884 ntBASIC26.23■■□□□ 1.79
RNF216Q9NWF9 KRT125P-201ENST00000546827 989 ntBASIC26.23■■□□□ 1.79
RNF216Q9NWF9 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RNF216Q9NWF9 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RNF216Q9NWF9 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
RNF216Q9NWF9 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RNF216Q9NWF9 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
RNF216Q9NWF9 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RNF216Q9NWF9 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
RNF216Q9NWF9 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
RNF216Q9NWF9 LRTM1-201ENST00000273286 1423 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RNF216Q9NWF9 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
RNF216Q9NWF9 BX664725.1-201ENST00000438252 379 ntBASIC26.21■■□□□ 1.79
RNF216Q9NWF9 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC26.21■■□□□ 1.79
RNF216Q9NWF9 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC26.2■■□□□ 1.79
RNF216Q9NWF9 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC26.2■■□□□ 1.78
RNF216Q9NWF9 AL356441.2-201ENST00000443009 864 ntBASIC26.2■■□□□ 1.78
RNF216Q9NWF9 AC006518.1-201ENST00000541449 943 ntBASIC26.2■■□□□ 1.78
RNF216Q9NWF9 AC093323.1-202ENST00000635031 2045 ntBASIC26.2■■□□□ 1.78
RNF216Q9NWF9 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
RNF216Q9NWF9 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
RNF216Q9NWF9 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC26.19■■□□□ 1.78
RNF216Q9NWF9 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
RNF216Q9NWF9 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
RNF216Q9NWF9 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RNF216Q9NWF9 KRT18P24-201ENST00000344739 1156 ntBASIC26.19■■□□□ 1.78
RNF216Q9NWF9 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC26.19■■□□□ 1.78
RNF216Q9NWF9 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RNF216Q9NWF9 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC26.19■■□□□ 1.78
RNF216Q9NWF9 AC132872.1-201ENST00000566986 1195 ntBASIC26.19■■□□□ 1.78
RNF216Q9NWF9 LINC00226-202ENST00000618204 1052 ntTSL 2 BASIC26.19■■□□□ 1.78
RNF216Q9NWF9 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RNF216Q9NWF9 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
RNF216Q9NWF9 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
RNF216Q9NWF9 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC26.18■■□□□ 1.78
RNF216Q9NWF9 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
RNF216Q9NWF9 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC26.18■■□□□ 1.78
RNF216Q9NWF9 AC103798.2-201ENST00000624292 632 ntBASIC26.18■■□□□ 1.78
RNF216Q9NWF9 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC26.17■■□□□ 1.78
RNF216Q9NWF9 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
RNF216Q9NWF9 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
RNF216Q9NWF9 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
RNF216Q9NWF9 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC26.17■■□□□ 1.78
RNF216Q9NWF9 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
RNF216Q9NWF9 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC26.17■■□□□ 1.78
RNF216Q9NWF9 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC26.17■■□□□ 1.78
RNF216Q9NWF9 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
RNF216Q9NWF9 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
RNF216Q9NWF9 AC009712.1-201ENST00000564938 316 ntBASIC26.16■■□□□ 1.78
RNF216Q9NWF9 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC26.16■■□□□ 1.78
RNF216Q9NWF9 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
RNF216Q9NWF9 AC142472.1-201ENST00000612013 1741 ntBASIC26.16■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms