Protein–RNA interactions for Protein: Q9H3M0

KCNF1, Potassium voltage-gated channel subfamily F member 1, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNF1Q9H3M0 LSR-205ENST00000427250 1606 ntTSL 2 BASIC25.7■■□□□ 1.71
KCNF1Q9H3M0 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
KCNF1Q9H3M0 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
KCNF1Q9H3M0 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC25.7■■□□□ 1.7
KCNF1Q9H3M0 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
KCNF1Q9H3M0 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
KCNF1Q9H3M0 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
KCNF1Q9H3M0 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC25.7■■□□□ 1.7
KCNF1Q9H3M0 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
KCNF1Q9H3M0 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC25.7■■□□□ 1.7
KCNF1Q9H3M0 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC25.69■■□□□ 1.7
KCNF1Q9H3M0 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
KCNF1Q9H3M0 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
KCNF1Q9H3M0 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
KCNF1Q9H3M0 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC25.69■■□□□ 1.7
KCNF1Q9H3M0 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
KCNF1Q9H3M0 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
KCNF1Q9H3M0 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
KCNF1Q9H3M0 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
KCNF1Q9H3M0 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
KCNF1Q9H3M0 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC25.68■■□□□ 1.7
KCNF1Q9H3M0 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
KCNF1Q9H3M0 MIR6089-201ENST00000616698 64 ntBASIC25.68■■□□□ 1.7
KCNF1Q9H3M0 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
KCNF1Q9H3M0 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
KCNF1Q9H3M0 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
KCNF1Q9H3M0 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
KCNF1Q9H3M0 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
KCNF1Q9H3M0 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC25.67■■□□□ 1.7
KCNF1Q9H3M0 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
KCNF1Q9H3M0 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
KCNF1Q9H3M0 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
KCNF1Q9H3M0 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
KCNF1Q9H3M0 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
KCNF1Q9H3M0 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
KCNF1Q9H3M0 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
KCNF1Q9H3M0 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC25.66■■□□□ 1.7
KCNF1Q9H3M0 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC25.66■■□□□ 1.7
KCNF1Q9H3M0 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
KCNF1Q9H3M0 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
KCNF1Q9H3M0 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC25.66■■□□□ 1.7
KCNF1Q9H3M0 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
KCNF1Q9H3M0 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
KCNF1Q9H3M0 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
KCNF1Q9H3M0 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
KCNF1Q9H3M0 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
KCNF1Q9H3M0 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
KCNF1Q9H3M0 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.7
KCNF1Q9H3M0 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC25.64■■□□□ 1.7
KCNF1Q9H3M0 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
KCNF1Q9H3M0 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC25.64■■□□□ 1.7
KCNF1Q9H3M0 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC25.64■■□□□ 1.7
KCNF1Q9H3M0 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC25.64■■□□□ 1.7
KCNF1Q9H3M0 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC25.64■■□□□ 1.7
KCNF1Q9H3M0 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC25.64■■□□□ 1.7
KCNF1Q9H3M0 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
KCNF1Q9H3M0 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
KCNF1Q9H3M0 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
KCNF1Q9H3M0 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC25.64■■□□□ 1.69
KCNF1Q9H3M0 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
KCNF1Q9H3M0 AL359258.2-201ENST00000564063 1566 ntBASIC25.64■■□□□ 1.69
KCNF1Q9H3M0 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
KCNF1Q9H3M0 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
KCNF1Q9H3M0 MIR219A2-201ENST00000608502 1504 ntBASIC25.63■■□□□ 1.69
KCNF1Q9H3M0 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
KCNF1Q9H3M0 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
KCNF1Q9H3M0 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
KCNF1Q9H3M0 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
KCNF1Q9H3M0 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
KCNF1Q9H3M0 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
KCNF1Q9H3M0 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC25.62■■□□□ 1.69
KCNF1Q9H3M0 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
KCNF1Q9H3M0 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC25.62■■□□□ 1.69
KCNF1Q9H3M0 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
KCNF1Q9H3M0 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
KCNF1Q9H3M0 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
KCNF1Q9H3M0 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
KCNF1Q9H3M0 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
KCNF1Q9H3M0 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
KCNF1Q9H3M0 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
KCNF1Q9H3M0 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
KCNF1Q9H3M0 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
KCNF1Q9H3M0 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
KCNF1Q9H3M0 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
KCNF1Q9H3M0 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC25.6■■□□□ 1.69
KCNF1Q9H3M0 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
KCNF1Q9H3M0 HLA-L-211ENST00000482052 1765 ntBASIC25.59■■□□□ 1.69
KCNF1Q9H3M0 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
KCNF1Q9H3M0 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
KCNF1Q9H3M0 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
KCNF1Q9H3M0 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
KCNF1Q9H3M0 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC25.59■■□□□ 1.69
KCNF1Q9H3M0 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
KCNF1Q9H3M0 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC25.59■■□□□ 1.69
KCNF1Q9H3M0 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
KCNF1Q9H3M0 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC25.59■■□□□ 1.69
KCNF1Q9H3M0 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC25.59■■□□□ 1.69
KCNF1Q9H3M0 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC25.58■■□□□ 1.69
KCNF1Q9H3M0 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
KCNF1Q9H3M0 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms