Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SNX25Q9H3E2 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC25.05■■□□□ 1.6
SNX25Q9H3E2 RNF146-205ENST00000477776 762 ntTSL 3 BASIC25.05■■□□□ 1.6
SNX25Q9H3E2 GAK-223ENST00000628912 497 ntTSL 5 BASIC25.05■■□□□ 1.6
SNX25Q9H3E2 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SNX25Q9H3E2 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC25.04■■□□□ 1.6
SNX25Q9H3E2 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SNX25Q9H3E2 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
SNX25Q9H3E2 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
SNX25Q9H3E2 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
SNX25Q9H3E2 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SNX25Q9H3E2 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
SNX25Q9H3E2 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SNX25Q9H3E2 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC25.03■■□□□ 1.6
SNX25Q9H3E2 AC090877.2-201ENST00000558441 1738 ntBASIC25.03■■□□□ 1.6
SNX25Q9H3E2 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SNX25Q9H3E2 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
SNX25Q9H3E2 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SNX25Q9H3E2 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SNX25Q9H3E2 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC25.03■■□□□ 1.6
SNX25Q9H3E2 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC25.03■■□□□ 1.6
SNX25Q9H3E2 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
SNX25Q9H3E2 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC25.02■■□□□ 1.6
SNX25Q9H3E2 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC25.02■■□□□ 1.6
SNX25Q9H3E2 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SNX25Q9H3E2 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC25.02■■□□□ 1.6
SNX25Q9H3E2 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SNX25Q9H3E2 MIR4281-201ENST00000580852 62 ntBASIC25.02■■□□□ 1.6
SNX25Q9H3E2 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC25.02■■□□□ 1.6
SNX25Q9H3E2 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
SNX25Q9H3E2 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
SNX25Q9H3E2 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
SNX25Q9H3E2 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
SNX25Q9H3E2 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC25.01■■□□□ 1.59
SNX25Q9H3E2 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC25.01■■□□□ 1.59
SNX25Q9H3E2 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC25.01■■□□□ 1.59
SNX25Q9H3E2 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
SNX25Q9H3E2 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SNX25Q9H3E2 SHF-207ENST00000560540 2062 ntTSL 5 BASIC25■■□□□ 1.59
SNX25Q9H3E2 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC25■■□□□ 1.59
SNX25Q9H3E2 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SNX25Q9H3E2 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
SNX25Q9H3E2 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
SNX25Q9H3E2 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SNX25Q9H3E2 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC24.98■■□□□ 1.59
SNX25Q9H3E2 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SNX25Q9H3E2 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
SNX25Q9H3E2 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
SNX25Q9H3E2 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
SNX25Q9H3E2 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SNX25Q9H3E2 BX664725.1-201ENST00000438252 379 ntBASIC24.98■■□□□ 1.59
SNX25Q9H3E2 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SNX25Q9H3E2 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC24.98■■□□□ 1.59
SNX25Q9H3E2 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SNX25Q9H3E2 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SNX25Q9H3E2 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
SNX25Q9H3E2 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SNX25Q9H3E2 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SNX25Q9H3E2 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
SNX25Q9H3E2 AC239859.2-201ENST00000444165 318 ntBASIC24.97■■□□□ 1.59
SNX25Q9H3E2 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC24.97■■□□□ 1.59
SNX25Q9H3E2 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
SNX25Q9H3E2 TRIR-205ENST00000592273 783 ntTSL 3 BASIC24.97■■□□□ 1.59
SNX25Q9H3E2 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC24.97■■□□□ 1.59
SNX25Q9H3E2 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
SNX25Q9H3E2 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC24.96■■□□□ 1.59
SNX25Q9H3E2 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
SNX25Q9H3E2 Z92544.1-202ENST00000571933 1220 ntBASIC24.96■■□□□ 1.59
SNX25Q9H3E2 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC24.96■■□□□ 1.59
SNX25Q9H3E2 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
SNX25Q9H3E2 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
SNX25Q9H3E2 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
SNX25Q9H3E2 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
SNX25Q9H3E2 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
SNX25Q9H3E2 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SNX25Q9H3E2 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
SNX25Q9H3E2 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SNX25Q9H3E2 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
SNX25Q9H3E2 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC24.95■■□□□ 1.58
SNX25Q9H3E2 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC24.95■■□□□ 1.58
SNX25Q9H3E2 AC137630.3-201ENST00000607245 391 ntBASIC24.95■■□□□ 1.58
SNX25Q9H3E2 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SNX25Q9H3E2 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
SNX25Q9H3E2 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SNX25Q9H3E2 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SNX25Q9H3E2 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
SNX25Q9H3E2 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.58
SNX25Q9H3E2 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SNX25Q9H3E2 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
SNX25Q9H3E2 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC24.94■■□□□ 1.58
SNX25Q9H3E2 HES6-204ENST00000409182 863 ntTSL 2 BASIC24.94■■□□□ 1.58
SNX25Q9H3E2 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC24.94■■□□□ 1.58
SNX25Q9H3E2 KRT125P-201ENST00000546827 989 ntBASIC24.94■■□□□ 1.58
SNX25Q9H3E2 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC24.94■■□□□ 1.58
SNX25Q9H3E2 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
SNX25Q9H3E2 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC24.94■■□□□ 1.58
SNX25Q9H3E2 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC24.94■■□□□ 1.58
SNX25Q9H3E2 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
SNX25Q9H3E2 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
SNX25Q9H3E2 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms