Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC30.95■■■□□ 2.54
PCDH11XQ9BZA7 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.54
PCDH11XQ9BZA7 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC30.95■■■□□ 2.54
PCDH11XQ9BZA7 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
PCDH11XQ9BZA7 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
PCDH11XQ9BZA7 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
PCDH11XQ9BZA7 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
PCDH11XQ9BZA7 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC30.94■■■□□ 2.54
PCDH11XQ9BZA7 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
PCDH11XQ9BZA7 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC30.93■■■□□ 2.54
PCDH11XQ9BZA7 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
PCDH11XQ9BZA7 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
PCDH11XQ9BZA7 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
PCDH11XQ9BZA7 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC30.92■■■□□ 2.54
PCDH11XQ9BZA7 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC30.92■■■□□ 2.54
PCDH11XQ9BZA7 CLTA-206ENST00000466396 695 ntTSL 2 BASIC30.92■■■□□ 2.54
PCDH11XQ9BZA7 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC30.92■■■□□ 2.54
PCDH11XQ9BZA7 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
PCDH11XQ9BZA7 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC30.91■■■□□ 2.54
PCDH11XQ9BZA7 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
PCDH11XQ9BZA7 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
PCDH11XQ9BZA7 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC30.91■■■□□ 2.54
PCDH11XQ9BZA7 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
PCDH11XQ9BZA7 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC30.9■■■□□ 2.54
PCDH11XQ9BZA7 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC30.9■■■□□ 2.54
PCDH11XQ9BZA7 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC30.9■■■□□ 2.54
PCDH11XQ9BZA7 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC30.9■■■□□ 2.54
PCDH11XQ9BZA7 AC090877.2-201ENST00000558441 1738 ntBASIC30.9■■■□□ 2.54
PCDH11XQ9BZA7 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
PCDH11XQ9BZA7 MIR6722-201ENST00000617286 78 ntBASIC30.89■■■□□ 2.54
PCDH11XQ9BZA7 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC30.89■■■□□ 2.53
PCDH11XQ9BZA7 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
PCDH11XQ9BZA7 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC30.88■■■□□ 2.53
PCDH11XQ9BZA7 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
PCDH11XQ9BZA7 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC30.87■■■□□ 2.53
PCDH11XQ9BZA7 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC30.86■■■□□ 2.53
PCDH11XQ9BZA7 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
PCDH11XQ9BZA7 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC30.86■■■□□ 2.53
PCDH11XQ9BZA7 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
PCDH11XQ9BZA7 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
PCDH11XQ9BZA7 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
PCDH11XQ9BZA7 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
PCDH11XQ9BZA7 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC30.85■■■□□ 2.53
PCDH11XQ9BZA7 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
PCDH11XQ9BZA7 AC106739.1-201ENST00000617035 715 ntBASIC30.85■■■□□ 2.53
PCDH11XQ9BZA7 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC30.85■■■□□ 2.53
PCDH11XQ9BZA7 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC30.85■■■□□ 2.53
PCDH11XQ9BZA7 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
PCDH11XQ9BZA7 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
PCDH11XQ9BZA7 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
PCDH11XQ9BZA7 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
PCDH11XQ9BZA7 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC30.83■■■□□ 2.53
PCDH11XQ9BZA7 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
PCDH11XQ9BZA7 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC30.83■■■□□ 2.53
PCDH11XQ9BZA7 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC30.83■■■□□ 2.53
PCDH11XQ9BZA7 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC30.83■■■□□ 2.53
PCDH11XQ9BZA7 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
PCDH11XQ9BZA7 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
PCDH11XQ9BZA7 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC30.83■■■□□ 2.53
PCDH11XQ9BZA7 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC30.82■■■□□ 2.52
PCDH11XQ9BZA7 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC30.82■■■□□ 2.52
PCDH11XQ9BZA7 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
PCDH11XQ9BZA7 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
PCDH11XQ9BZA7 GUK1-205ENST00000366722 850 ntTSL 3 BASIC30.8■■■□□ 2.52
PCDH11XQ9BZA7 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC30.8■■■□□ 2.52
PCDH11XQ9BZA7 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC30.8■■■□□ 2.52
PCDH11XQ9BZA7 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC30.8■■■□□ 2.52
PCDH11XQ9BZA7 EBPL-204ENST00000378272 766 ntTSL 3 BASIC30.79■■■□□ 2.52
PCDH11XQ9BZA7 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
PCDH11XQ9BZA7 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
PCDH11XQ9BZA7 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
PCDH11XQ9BZA7 PBX2P1-201ENST00000493219 1291 ntBASIC30.78■■■□□ 2.52
PCDH11XQ9BZA7 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
PCDH11XQ9BZA7 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC30.78■■■□□ 2.52
PCDH11XQ9BZA7 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
PCDH11XQ9BZA7 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC30.77■■■□□ 2.52
PCDH11XQ9BZA7 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC30.77■■■□□ 2.52
PCDH11XQ9BZA7 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
PCDH11XQ9BZA7 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
PCDH11XQ9BZA7 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC30.77■■■□□ 2.52
PCDH11XQ9BZA7 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
PCDH11XQ9BZA7 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC30.76■■■□□ 2.52
PCDH11XQ9BZA7 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC30.76■■■□□ 2.52
PCDH11XQ9BZA7 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC30.76■■■□□ 2.52
PCDH11XQ9BZA7 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC30.76■■■□□ 2.52
PCDH11XQ9BZA7 AC096887.2-201ENST00000623443 1957 ntBASIC30.76■■■□□ 2.52
PCDH11XQ9BZA7 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC30.76■■■□□ 2.51
PCDH11XQ9BZA7 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
PCDH11XQ9BZA7 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC30.75■■■□□ 2.51
PCDH11XQ9BZA7 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC30.75■■■□□ 2.51
PCDH11XQ9BZA7 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
PCDH11XQ9BZA7 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC30.75■■■□□ 2.51
PCDH11XQ9BZA7 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC30.75■■■□□ 2.51
PCDH11XQ9BZA7 LBH-205ENST00000407930 756 ntTSL 2 BASIC30.74■■■□□ 2.51
PCDH11XQ9BZA7 ZNRF2P3-201ENST00000424200 374 ntBASIC30.74■■■□□ 2.51
PCDH11XQ9BZA7 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
PCDH11XQ9BZA7 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC30.74■■■□□ 2.51
PCDH11XQ9BZA7 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC30.73■■■□□ 2.51
PCDH11XQ9BZA7 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC30.73■■■□□ 2.51
PCDH11XQ9BZA7 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC30.73■■■□□ 2.51
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms