Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HDHD3Q9BSH5 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HDHD3Q9BSH5 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HDHD3Q9BSH5 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HDHD3Q9BSH5 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.78■□□□□ 0.76
HDHD3Q9BSH5 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.78■□□□□ 0.76
HDHD3Q9BSH5 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.78■□□□□ 0.76
HDHD3Q9BSH5 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
HDHD3Q9BSH5 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
HDHD3Q9BSH5 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
HDHD3Q9BSH5 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HDHD3Q9BSH5 AC141586.4-201ENST00000624558 1573 ntBASIC19.78■□□□□ 0.76
HDHD3Q9BSH5 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HDHD3Q9BSH5 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
HDHD3Q9BSH5 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HDHD3Q9BSH5 MIR7108-201ENST00000614319 87 ntBASIC19.77■□□□□ 0.76
HDHD3Q9BSH5 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
HDHD3Q9BSH5 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
HDHD3Q9BSH5 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.77■□□□□ 0.75
HDHD3Q9BSH5 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
HDHD3Q9BSH5 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HDHD3Q9BSH5 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HDHD3Q9BSH5 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HDHD3Q9BSH5 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.76■□□□□ 0.75
HDHD3Q9BSH5 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.76■□□□□ 0.75
HDHD3Q9BSH5 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HDHD3Q9BSH5 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC19.76■□□□□ 0.75
HDHD3Q9BSH5 MIR6089-201ENST00000616698 64 ntBASIC19.76■□□□□ 0.75
HDHD3Q9BSH5 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HDHD3Q9BSH5 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HDHD3Q9BSH5 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.76■□□□□ 0.75
HDHD3Q9BSH5 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.76■□□□□ 0.75
HDHD3Q9BSH5 ABCB10P4-201ENST00000566803 2184 ntBASIC19.76■□□□□ 0.75
HDHD3Q9BSH5 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
HDHD3Q9BSH5 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
HDHD3Q9BSH5 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HDHD3Q9BSH5 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HDHD3Q9BSH5 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HDHD3Q9BSH5 RPS2-202ENST00000526522 924 ntTSL 2 BASIC19.75■□□□□ 0.75
HDHD3Q9BSH5 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC19.75■□□□□ 0.75
HDHD3Q9BSH5 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HDHD3Q9BSH5 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.74■□□□□ 0.75
HDHD3Q9BSH5 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
HDHD3Q9BSH5 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.74■□□□□ 0.75
HDHD3Q9BSH5 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
HDHD3Q9BSH5 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HDHD3Q9BSH5 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HDHD3Q9BSH5 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
HDHD3Q9BSH5 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
HDHD3Q9BSH5 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HDHD3Q9BSH5 RP9P-202ENST00000450133 1212 ntBASIC19.73■□□□□ 0.75
HDHD3Q9BSH5 PVT1-219ENST00000523427 938 ntTSL 3 BASIC19.73■□□□□ 0.75
HDHD3Q9BSH5 AC093536.1-201ENST00000569153 554 ntBASIC19.73■□□□□ 0.75
HDHD3Q9BSH5 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.73■□□□□ 0.75
HDHD3Q9BSH5 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HDHD3Q9BSH5 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.73■□□□□ 0.75
HDHD3Q9BSH5 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.73■□□□□ 0.75
HDHD3Q9BSH5 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
HDHD3Q9BSH5 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.72■□□□□ 0.75
HDHD3Q9BSH5 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
HDHD3Q9BSH5 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HDHD3Q9BSH5 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.72■□□□□ 0.75
HDHD3Q9BSH5 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HDHD3Q9BSH5 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HDHD3Q9BSH5 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
HDHD3Q9BSH5 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HDHD3Q9BSH5 ECEL1P2-201ENST00000461596 1295 ntBASIC19.71■□□□□ 0.75
HDHD3Q9BSH5 AC022413.1-201ENST00000624602 984 ntBASIC19.71■□□□□ 0.75
HDHD3Q9BSH5 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
HDHD3Q9BSH5 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HDHD3Q9BSH5 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HDHD3Q9BSH5 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.7■□□□□ 0.74
HDHD3Q9BSH5 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
HDHD3Q9BSH5 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC19.7■□□□□ 0.74
HDHD3Q9BSH5 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.7■□□□□ 0.74
HDHD3Q9BSH5 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
HDHD3Q9BSH5 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
HDHD3Q9BSH5 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HDHD3Q9BSH5 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
HDHD3Q9BSH5 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.69■□□□□ 0.74
HDHD3Q9BSH5 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.69■□□□□ 0.74
HDHD3Q9BSH5 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.69■□□□□ 0.74
HDHD3Q9BSH5 MIR639-201ENST00000384974 98 ntBASIC19.69■□□□□ 0.74
HDHD3Q9BSH5 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.69■□□□□ 0.74
HDHD3Q9BSH5 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HDHD3Q9BSH5 HLA-L-211ENST00000482052 1765 ntBASIC19.69■□□□□ 0.74
HDHD3Q9BSH5 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HDHD3Q9BSH5 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
HDHD3Q9BSH5 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.69■□□□□ 0.74
HDHD3Q9BSH5 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HDHD3Q9BSH5 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HDHD3Q9BSH5 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
HDHD3Q9BSH5 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HDHD3Q9BSH5 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HDHD3Q9BSH5 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.68■□□□□ 0.74
HDHD3Q9BSH5 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.68■□□□□ 0.74
HDHD3Q9BSH5 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HDHD3Q9BSH5 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HDHD3Q9BSH5 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HDHD3Q9BSH5 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 160.5 ms