Protein–RNA interactions for Protein: Q96MV1

TMEM56, Transmembrane protein 56, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56Q96MV1 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TMEM56Q96MV1 ABHD17AP4-201ENST00000411545 909 ntBASIC19.28■□□□□ 0.68
TMEM56Q96MV1 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.28■□□□□ 0.68
TMEM56Q96MV1 MIR6089-201ENST00000616698 64 ntBASIC19.28■□□□□ 0.68
TMEM56Q96MV1 CR559946.2-201ENST00000623684 991 ntBASIC19.28■□□□□ 0.68
TMEM56Q96MV1 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM56Q96MV1 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM56Q96MV1 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM56Q96MV1 AC079834.2-201ENST00000609776 1949 ntBASIC19.27■□□□□ 0.68
TMEM56Q96MV1 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM56Q96MV1 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.27■□□□□ 0.68
TMEM56Q96MV1 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
TMEM56Q96MV1 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM56Q96MV1 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.27■□□□□ 0.68
TMEM56Q96MV1 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TMEM56Q96MV1 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM56Q96MV1 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM56Q96MV1 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.26■□□□□ 0.67
TMEM56Q96MV1 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
TMEM56Q96MV1 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.26■□□□□ 0.67
TMEM56Q96MV1 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.26■□□□□ 0.67
TMEM56Q96MV1 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM56Q96MV1 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TMEM56Q96MV1 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.25■□□□□ 0.67
TMEM56Q96MV1 MACF1-219ENST00000484793 834 ntTSL 2 BASIC19.25■□□□□ 0.67
TMEM56Q96MV1 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.25■□□□□ 0.67
TMEM56Q96MV1 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM56Q96MV1 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM56Q96MV1 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM56Q96MV1 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TMEM56Q96MV1 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.24■□□□□ 0.67
TMEM56Q96MV1 MIR3648-2-201ENST00000581792 180 ntBASIC19.24■□□□□ 0.67
TMEM56Q96MV1 MIR3648-1-201ENST00000615959 180 ntBASIC19.24■□□□□ 0.67
TMEM56Q96MV1 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TMEM56Q96MV1 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.24■□□□□ 0.67
TMEM56Q96MV1 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
TMEM56Q96MV1 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM56Q96MV1 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM56Q96MV1 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.24■□□□□ 0.67
TMEM56Q96MV1 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM56Q96MV1 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM56Q96MV1 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM56Q96MV1 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM56Q96MV1 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM56Q96MV1 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM56Q96MV1 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM56Q96MV1 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM56Q96MV1 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM56Q96MV1 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM56Q96MV1 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM56Q96MV1 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM56Q96MV1 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM56Q96MV1 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TMEM56Q96MV1 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TMEM56Q96MV1 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.22■□□□□ 0.67
TMEM56Q96MV1 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.22■□□□□ 0.67
TMEM56Q96MV1 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.22■□□□□ 0.67
TMEM56Q96MV1 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.21■□□□□ 0.67
TMEM56Q96MV1 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM56Q96MV1 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM56Q96MV1 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM56Q96MV1 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC19.21■□□□□ 0.67
TMEM56Q96MV1 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM56Q96MV1 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
TMEM56Q96MV1 ABCB10P4-201ENST00000566803 2184 ntBASIC19.2■□□□□ 0.66
TMEM56Q96MV1 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.2■□□□□ 0.66
TMEM56Q96MV1 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM56Q96MV1 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM56Q96MV1 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.2■□□□□ 0.66
TMEM56Q96MV1 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM56Q96MV1 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
TMEM56Q96MV1 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM56Q96MV1 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TMEM56Q96MV1 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM56Q96MV1 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM56Q96MV1 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM56Q96MV1 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.18■□□□□ 0.66
TMEM56Q96MV1 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM56Q96MV1 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM56Q96MV1 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
TMEM56Q96MV1 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM56Q96MV1 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM56Q96MV1 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.18■□□□□ 0.66
TMEM56Q96MV1 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.18■□□□□ 0.66
TMEM56Q96MV1 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.17■□□□□ 0.66
TMEM56Q96MV1 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM56Q96MV1 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TMEM56Q96MV1 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM56Q96MV1 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC19.17■□□□□ 0.66
TMEM56Q96MV1 METRNL-202ENST00000570778 967 ntTSL 5 BASIC19.17■□□□□ 0.66
TMEM56Q96MV1 AC016575.1-201ENST00000607026 382 ntBASIC19.17■□□□□ 0.66
TMEM56Q96MV1 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM56Q96MV1 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.17■□□□□ 0.66
TMEM56Q96MV1 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM56Q96MV1 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM56Q96MV1 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.16■□□□□ 0.66
TMEM56Q96MV1 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM56Q96MV1 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM56Q96MV1 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM56Q96MV1 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms