Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHCHD1Q96BP2 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHCHD1Q96BP2 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHCHD1Q96BP2 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC17.12■□□□□ 0.33
CHCHD1Q96BP2 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CHCHD1Q96BP2 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC17.11■□□□□ 0.33
CHCHD1Q96BP2 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC17.11■□□□□ 0.33
CHCHD1Q96BP2 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC17.11■□□□□ 0.33
CHCHD1Q96BP2 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHCHD1Q96BP2 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHCHD1Q96BP2 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CHCHD1Q96BP2 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHCHD1Q96BP2 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHCHD1Q96BP2 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CHCHD1Q96BP2 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC17.1■□□□□ 0.33
CHCHD1Q96BP2 LINC00526-201ENST00000581067 1875 ntBASIC17.1■□□□□ 0.33
CHCHD1Q96BP2 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CHCHD1Q96BP2 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC17.1■□□□□ 0.33
CHCHD1Q96BP2 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC17.1■□□□□ 0.33
CHCHD1Q96BP2 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHCHD1Q96BP2 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHCHD1Q96BP2 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHCHD1Q96BP2 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHCHD1Q96BP2 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC17.09■□□□□ 0.33
CHCHD1Q96BP2 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHCHD1Q96BP2 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHCHD1Q96BP2 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.09■□□□□ 0.33
CHCHD1Q96BP2 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHCHD1Q96BP2 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHCHD1Q96BP2 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CHCHD1Q96BP2 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHCHD1Q96BP2 SHD-204ENST00000599689 1729 ntTSL 5 BASIC17.08■□□□□ 0.32
CHCHD1Q96BP2 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC17.08■□□□□ 0.32
CHCHD1Q96BP2 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHCHD1Q96BP2 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
CHCHD1Q96BP2 LINC00273-201ENST00000539813 1452 ntBASIC17.08■□□□□ 0.32
CHCHD1Q96BP2 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHCHD1Q96BP2 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC17.08■□□□□ 0.32
CHCHD1Q96BP2 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHCHD1Q96BP2 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHCHD1Q96BP2 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHCHD1Q96BP2 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHCHD1Q96BP2 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHCHD1Q96BP2 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHCHD1Q96BP2 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHCHD1Q96BP2 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHCHD1Q96BP2 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHCHD1Q96BP2 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC17.07■□□□□ 0.32
CHCHD1Q96BP2 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC17.07■□□□□ 0.32
CHCHD1Q96BP2 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CHCHD1Q96BP2 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC17.07■□□□□ 0.32
CHCHD1Q96BP2 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHCHD1Q96BP2 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.07■□□□□ 0.32
CHCHD1Q96BP2 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHCHD1Q96BP2 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHCHD1Q96BP2 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHCHD1Q96BP2 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHCHD1Q96BP2 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHCHD1Q96BP2 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CHCHD1Q96BP2 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
CHCHD1Q96BP2 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHCHD1Q96BP2 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHCHD1Q96BP2 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.05■□□□□ 0.32
CHCHD1Q96BP2 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHCHD1Q96BP2 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHCHD1Q96BP2 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
CHCHD1Q96BP2 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHCHD1Q96BP2 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHCHD1Q96BP2 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHCHD1Q96BP2 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHCHD1Q96BP2 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC17.04■□□□□ 0.32
CHCHD1Q96BP2 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHCHD1Q96BP2 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHCHD1Q96BP2 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC17.04■□□□□ 0.32
CHCHD1Q96BP2 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHCHD1Q96BP2 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHCHD1Q96BP2 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHCHD1Q96BP2 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHCHD1Q96BP2 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHCHD1Q96BP2 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC17.04■□□□□ 0.32
CHCHD1Q96BP2 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHCHD1Q96BP2 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHCHD1Q96BP2 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHCHD1Q96BP2 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHCHD1Q96BP2 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHCHD1Q96BP2 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CHCHD1Q96BP2 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHCHD1Q96BP2 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHCHD1Q96BP2 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHCHD1Q96BP2 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHCHD1Q96BP2 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHCHD1Q96BP2 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHCHD1Q96BP2 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CHCHD1Q96BP2 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHCHD1Q96BP2 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHCHD1Q96BP2 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CHCHD1Q96BP2 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHCHD1Q96BP2 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHCHD1Q96BP2 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHCHD1Q96BP2 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms