Protein–RNA interactions for Protein: Q5VVS0

C1orf140, Putative uncharacterized protein C1orf140, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf140Q5VVS0 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
C1orf140Q5VVS0 AL139125.2-201ENST00000623134 1869 ntBASIC21.19■□□□□ 0.98
C1orf140Q5VVS0 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
C1orf140Q5VVS0 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.19■□□□□ 0.98
C1orf140Q5VVS0 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
C1orf140Q5VVS0 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
C1orf140Q5VVS0 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
C1orf140Q5VVS0 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.18■□□□□ 0.98
C1orf140Q5VVS0 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.18■□□□□ 0.98
C1orf140Q5VVS0 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
C1orf140Q5VVS0 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
C1orf140Q5VVS0 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
C1orf140Q5VVS0 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.18■□□□□ 0.98
C1orf140Q5VVS0 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
C1orf140Q5VVS0 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.18■□□□□ 0.98
C1orf140Q5VVS0 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
C1orf140Q5VVS0 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
C1orf140Q5VVS0 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
C1orf140Q5VVS0 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
C1orf140Q5VVS0 TSPY13P-201ENST00000338964 914 ntBASIC21.17■□□□□ 0.98
C1orf140Q5VVS0 AL592295.1-201ENST00000400984 884 ntBASIC21.17■□□□□ 0.98
C1orf140Q5VVS0 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.17■□□□□ 0.98
C1orf140Q5VVS0 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.17■□□□□ 0.98
C1orf140Q5VVS0 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
C1orf140Q5VVS0 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
C1orf140Q5VVS0 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
C1orf140Q5VVS0 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
C1orf140Q5VVS0 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
C1orf140Q5VVS0 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
C1orf140Q5VVS0 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.16■□□□□ 0.98
C1orf140Q5VVS0 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
C1orf140Q5VVS0 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
C1orf140Q5VVS0 AC012354.3-201ENST00000623734 483 ntBASIC21.16■□□□□ 0.98
C1orf140Q5VVS0 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
C1orf140Q5VVS0 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
C1orf140Q5VVS0 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.15■□□□□ 0.98
C1orf140Q5VVS0 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
C1orf140Q5VVS0 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
C1orf140Q5VVS0 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
C1orf140Q5VVS0 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
C1orf140Q5VVS0 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
C1orf140Q5VVS0 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
C1orf140Q5VVS0 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.15■□□□□ 0.98
C1orf140Q5VVS0 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
C1orf140Q5VVS0 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
C1orf140Q5VVS0 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
C1orf140Q5VVS0 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
C1orf140Q5VVS0 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
C1orf140Q5VVS0 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.14■□□□□ 0.97
C1orf140Q5VVS0 BHLHE23-202ENST00000612929 1109 ntBASIC21.14■□□□□ 0.97
C1orf140Q5VVS0 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
C1orf140Q5VVS0 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
C1orf140Q5VVS0 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.13■□□□□ 0.97
C1orf140Q5VVS0 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
C1orf140Q5VVS0 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
C1orf140Q5VVS0 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
C1orf140Q5VVS0 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.13■□□□□ 0.97
C1orf140Q5VVS0 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
C1orf140Q5VVS0 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
C1orf140Q5VVS0 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
C1orf140Q5VVS0 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
C1orf140Q5VVS0 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.12■□□□□ 0.97
C1orf140Q5VVS0 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.12■□□□□ 0.97
C1orf140Q5VVS0 AC019171.1-201ENST00000601251 1056 ntBASIC21.12■□□□□ 0.97
C1orf140Q5VVS0 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.12■□□□□ 0.97
C1orf140Q5VVS0 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
C1orf140Q5VVS0 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
C1orf140Q5VVS0 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.12■□□□□ 0.97
C1orf140Q5VVS0 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
C1orf140Q5VVS0 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.11■□□□□ 0.97
C1orf140Q5VVS0 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
C1orf140Q5VVS0 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
C1orf140Q5VVS0 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
C1orf140Q5VVS0 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
C1orf140Q5VVS0 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
C1orf140Q5VVS0 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.1■□□□□ 0.97
C1orf140Q5VVS0 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
C1orf140Q5VVS0 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
C1orf140Q5VVS0 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
C1orf140Q5VVS0 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
C1orf140Q5VVS0 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
C1orf140Q5VVS0 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.1■□□□□ 0.97
C1orf140Q5VVS0 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
C1orf140Q5VVS0 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
C1orf140Q5VVS0 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
C1orf140Q5VVS0 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.1■□□□□ 0.97
C1orf140Q5VVS0 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
C1orf140Q5VVS0 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
C1orf140Q5VVS0 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
C1orf140Q5VVS0 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
C1orf140Q5VVS0 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
C1orf140Q5VVS0 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.09■□□□□ 0.97
C1orf140Q5VVS0 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
C1orf140Q5VVS0 LINC01124-201ENST00000409786 2117 ntBASIC21.09■□□□□ 0.97
C1orf140Q5VVS0 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
C1orf140Q5VVS0 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
C1orf140Q5VVS0 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.09■□□□□ 0.97
C1orf140Q5VVS0 AL033527.3-201ENST00000566366 1196 ntBASIC21.09■□□□□ 0.97
C1orf140Q5VVS0 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.09■□□□□ 0.97
C1orf140Q5VVS0 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms