Protein–RNA interactions for Protein: Q5VVM6

CCDC30, Coiled-coil domain-containing protein 30, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30Q5VVM6 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC30.12■■■□□ 2.41
CCDC30Q5VVM6 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC30.12■■■□□ 2.41
CCDC30Q5VVM6 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CCDC30Q5VVM6 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
CCDC30Q5VVM6 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC30.11■■■□□ 2.41
CCDC30Q5VVM6 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
CCDC30Q5VVM6 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CCDC30Q5VVM6 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC30.1■■■□□ 2.41
CCDC30Q5VVM6 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC30.1■■■□□ 2.41
CCDC30Q5VVM6 BX664725.1-201ENST00000438252 379 ntBASIC30.1■■■□□ 2.41
CCDC30Q5VVM6 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CCDC30Q5VVM6 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
CCDC30Q5VVM6 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
CCDC30Q5VVM6 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC30.08■■■□□ 2.41
CCDC30Q5VVM6 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
CCDC30Q5VVM6 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC30.08■■■□□ 2.41
CCDC30Q5VVM6 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
CCDC30Q5VVM6 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
CCDC30Q5VVM6 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
CCDC30Q5VVM6 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC30.08■■■□□ 2.41
CCDC30Q5VVM6 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC30.08■■■□□ 2.41
CCDC30Q5VVM6 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
CCDC30Q5VVM6 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC30.07■■■□□ 2.4
CCDC30Q5VVM6 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
CCDC30Q5VVM6 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
CCDC30Q5VVM6 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
CCDC30Q5VVM6 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC30.06■■■□□ 2.4
CCDC30Q5VVM6 GUSBP5-201ENST00000418136 578 ntBASIC30.06■■■□□ 2.4
CCDC30Q5VVM6 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC30.06■■■□□ 2.4
CCDC30Q5VVM6 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC30.06■■■□□ 2.4
CCDC30Q5VVM6 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC30.06■■■□□ 2.4
CCDC30Q5VVM6 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CCDC30Q5VVM6 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
CCDC30Q5VVM6 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CCDC30Q5VVM6 KRT125P-201ENST00000546827 989 ntBASIC30.05■■■□□ 2.4
CCDC30Q5VVM6 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC30.04■■■□□ 2.4
CCDC30Q5VVM6 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC30.04■■■□□ 2.4
CCDC30Q5VVM6 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC30.04■■■□□ 2.4
CCDC30Q5VVM6 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC30.04■■■□□ 2.4
CCDC30Q5VVM6 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC30.04■■■□□ 2.4
CCDC30Q5VVM6 AC021242.3-201ENST00000607598 1377 ntBASIC30.03■■■□□ 2.4
CCDC30Q5VVM6 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC30.03■■■□□ 2.4
CCDC30Q5VVM6 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC30.03■■■□□ 2.4
CCDC30Q5VVM6 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
CCDC30Q5VVM6 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
CCDC30Q5VVM6 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC30.02■■■□□ 2.4
CCDC30Q5VVM6 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
CCDC30Q5VVM6 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
CCDC30Q5VVM6 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
CCDC30Q5VVM6 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
CCDC30Q5VVM6 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC30.01■■■□□ 2.4
CCDC30Q5VVM6 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
CCDC30Q5VVM6 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC30.01■■■□□ 2.39
CCDC30Q5VVM6 MIR4787-201ENST00000607364 84 ntBASIC30.01■■■□□ 2.39
CCDC30Q5VVM6 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
CCDC30Q5VVM6 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
CCDC30Q5VVM6 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC30.01■■■□□ 2.39
CCDC30Q5VVM6 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC30■■■□□ 2.39
CCDC30Q5VVM6 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC30■■■□□ 2.39
CCDC30Q5VVM6 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC30■■■□□ 2.39
CCDC30Q5VVM6 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
CCDC30Q5VVM6 AF131216.4-201ENST00000638924 1588 ntBASIC29.99■■■□□ 2.39
CCDC30Q5VVM6 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC29.99■■■□□ 2.39
CCDC30Q5VVM6 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC29.99■■■□□ 2.39
CCDC30Q5VVM6 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
CCDC30Q5VVM6 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC29.98■■■□□ 2.39
CCDC30Q5VVM6 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC29.98■■■□□ 2.39
CCDC30Q5VVM6 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC29.98■■■□□ 2.39
CCDC30Q5VVM6 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC29.98■■■□□ 2.39
CCDC30Q5VVM6 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
CCDC30Q5VVM6 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
CCDC30Q5VVM6 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
CCDC30Q5VVM6 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC29.98■■■□□ 2.39
CCDC30Q5VVM6 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC29.98■■■□□ 2.39
CCDC30Q5VVM6 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
CCDC30Q5VVM6 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
CCDC30Q5VVM6 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC29.97■■■□□ 2.39
CCDC30Q5VVM6 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC29.97■■■□□ 2.39
CCDC30Q5VVM6 MIR6089-201ENST00000616698 64 ntBASIC29.97■■■□□ 2.39
CCDC30Q5VVM6 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
CCDC30Q5VVM6 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
CCDC30Q5VVM6 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
CCDC30Q5VVM6 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
CCDC30Q5VVM6 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC29.96■■■□□ 2.39
CCDC30Q5VVM6 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC29.96■■■□□ 2.39
CCDC30Q5VVM6 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC29.96■■■□□ 2.39
CCDC30Q5VVM6 CREM-229ENST00000474362 1030 ntTSL 2 BASIC29.96■■■□□ 2.39
CCDC30Q5VVM6 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC29.96■■■□□ 2.39
CCDC30Q5VVM6 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
CCDC30Q5VVM6 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
CCDC30Q5VVM6 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC29.96■■■□□ 2.39
CCDC30Q5VVM6 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
CCDC30Q5VVM6 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
CCDC30Q5VVM6 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC29.95■■■□□ 2.39
CCDC30Q5VVM6 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
CCDC30Q5VVM6 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC29.95■■■□□ 2.39
CCDC30Q5VVM6 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC29.95■■■□□ 2.38
CCDC30Q5VVM6 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC29.95■■■□□ 2.38
CCDC30Q5VVM6 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC29.95■■■□□ 2.38
CCDC30Q5VVM6 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC29.94■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms