Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC23.33■■□□□ 1.33
CAPNS1P04632 AC005837.3-201ENST00000612163 286 ntBASIC23.33■■□□□ 1.33
CAPNS1P04632 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
CAPNS1P04632 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC23.32■■□□□ 1.32
CAPNS1P04632 AC131281.2-201ENST00000520478 145 ntBASIC23.31■■□□□ 1.32
CAPNS1P04632 AC110285.6-201ENST00000617652 491 ntBASIC23.31■■□□□ 1.32
CAPNS1P04632 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
CAPNS1P04632 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CAPNS1P04632 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
CAPNS1P04632 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
CAPNS1P04632 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
CAPNS1P04632 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CAPNS1P04632 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.3■■□□□ 1.32
CAPNS1P04632 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CAPNS1P04632 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.29■■□□□ 1.32
CAPNS1P04632 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CAPNS1P04632 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CAPNS1P04632 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC23.29■■□□□ 1.32
CAPNS1P04632 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
CAPNS1P04632 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.28■■□□□ 1.32
CAPNS1P04632 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CAPNS1P04632 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.28■■□□□ 1.32
CAPNS1P04632 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC23.28■■□□□ 1.32
CAPNS1P04632 BX664725.1-201ENST00000438252 379 ntBASIC23.28■■□□□ 1.32
CAPNS1P04632 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
CAPNS1P04632 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
CAPNS1P04632 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CAPNS1P04632 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
CAPNS1P04632 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CAPNS1P04632 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CAPNS1P04632 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CAPNS1P04632 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CAPNS1P04632 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CAPNS1P04632 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
CAPNS1P04632 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CAPNS1P04632 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
CAPNS1P04632 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC23.26■■□□□ 1.31
CAPNS1P04632 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CAPNS1P04632 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
CAPNS1P04632 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
CAPNS1P04632 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.25■■□□□ 1.31
CAPNS1P04632 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CAPNS1P04632 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.25■■□□□ 1.31
CAPNS1P04632 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
CAPNS1P04632 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
CAPNS1P04632 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CAPNS1P04632 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC23.24■■□□□ 1.31
CAPNS1P04632 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CAPNS1P04632 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.24■■□□□ 1.31
CAPNS1P04632 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.24■■□□□ 1.31
CAPNS1P04632 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.24■■□□□ 1.31
CAPNS1P04632 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.24■■□□□ 1.31
CAPNS1P04632 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CAPNS1P04632 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
CAPNS1P04632 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.24■■□□□ 1.31
CAPNS1P04632 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
CAPNS1P04632 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CAPNS1P04632 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC23.23■■□□□ 1.31
CAPNS1P04632 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.23■■□□□ 1.31
CAPNS1P04632 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.23■■□□□ 1.31
CAPNS1P04632 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CAPNS1P04632 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CAPNS1P04632 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CAPNS1P04632 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.22■■□□□ 1.31
CAPNS1P04632 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.22■■□□□ 1.31
CAPNS1P04632 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CAPNS1P04632 AC133561.4-201ENST00000566112 224 ntBASIC23.22■■□□□ 1.31
CAPNS1P04632 RARRES2P6-201ENST00000567333 442 ntBASIC23.22■■□□□ 1.31
CAPNS1P04632 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.22■■□□□ 1.31
CAPNS1P04632 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CAPNS1P04632 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
CAPNS1P04632 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.21■■□□□ 1.31
CAPNS1P04632 RPS2P7-201ENST00000447334 885 ntBASIC23.21■■□□□ 1.31
CAPNS1P04632 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC23.21■■□□□ 1.31
CAPNS1P04632 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
CAPNS1P04632 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CAPNS1P04632 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CAPNS1P04632 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.2■■□□□ 1.3
CAPNS1P04632 AL136116.3-201ENST00000402907 1138 ntBASIC23.2■■□□□ 1.3
CAPNS1P04632 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CAPNS1P04632 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.2■■□□□ 1.3
CAPNS1P04632 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CAPNS1P04632 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.2■■□□□ 1.3
CAPNS1P04632 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CAPNS1P04632 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CAPNS1P04632 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.19■■□□□ 1.3
CAPNS1P04632 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CAPNS1P04632 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CAPNS1P04632 AC026271.2-201ENST00000428091 497 ntBASIC23.19■■□□□ 1.3
CAPNS1P04632 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CAPNS1P04632 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CAPNS1P04632 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
CAPNS1P04632 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.18■■□□□ 1.3
CAPNS1P04632 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
CAPNS1P04632 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CAPNS1P04632 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.18■■□□□ 1.3
CAPNS1P04632 AC137630.3-201ENST00000607245 391 ntBASIC23.18■■□□□ 1.3
CAPNS1P04632 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CAPNS1P04632 AC142381.3-201ENST00000568208 1670 ntBASIC23.18■■□□□ 1.3
CAPNS1P04632 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms