Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HLA-AP01891 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HLA-AP01891 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.69■□□□□ 0.74
HLA-AP01891 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-AP01891 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-AP01891 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
HLA-AP01891 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
HLA-AP01891 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.69■□□□□ 0.74
HLA-AP01891 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-AP01891 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-AP01891 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-AP01891 ABCB10P4-201ENST00000566803 2184 ntBASIC19.69■□□□□ 0.74
HLA-AP01891 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-AP01891 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-AP01891 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
HLA-AP01891 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-AP01891 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-AP01891 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.69■□□□□ 0.74
HLA-AP01891 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
HLA-AP01891 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-AP01891 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-AP01891 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-AP01891 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC19.68■□□□□ 0.74
HLA-AP01891 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC19.68■□□□□ 0.74
HLA-AP01891 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-AP01891 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-AP01891 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-AP01891 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-AP01891 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
HLA-AP01891 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-AP01891 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-AP01891 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-AP01891 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
HLA-AP01891 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
HLA-AP01891 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
HLA-AP01891 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-AP01891 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-AP01891 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-AP01891 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.66■□□□□ 0.74
HLA-AP01891 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-AP01891 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-AP01891 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC19.66■□□□□ 0.74
HLA-AP01891 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-AP01891 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-AP01891 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.66■□□□□ 0.74
HLA-AP01891 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-AP01891 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-AP01891 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
HLA-AP01891 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.66■□□□□ 0.74
HLA-AP01891 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-AP01891 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.65■□□□□ 0.74
HLA-AP01891 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-AP01891 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-AP01891 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-AP01891 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-AP01891 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-AP01891 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HLA-AP01891 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.64■□□□□ 0.74
HLA-AP01891 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
HLA-AP01891 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.64■□□□□ 0.73
HLA-AP01891 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC19.64■□□□□ 0.73
HLA-AP01891 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-AP01891 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-AP01891 AL117328.2-201ENST00000624617 1940 ntBASIC19.64■□□□□ 0.73
HLA-AP01891 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-AP01891 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-AP01891 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.63■□□□□ 0.73
HLA-AP01891 LINC01971-201ENST00000617888 1048 ntBASIC19.63■□□□□ 0.73
HLA-AP01891 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.63■□□□□ 0.73
HLA-AP01891 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-AP01891 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
HLA-AP01891 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-AP01891 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-AP01891 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC19.62■□□□□ 0.73
HLA-AP01891 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.62■□□□□ 0.73
HLA-AP01891 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-AP01891 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.61■□□□□ 0.73
HLA-AP01891 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC19.61■□□□□ 0.73
HLA-AP01891 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-AP01891 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
HLA-AP01891 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-AP01891 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-AP01891 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-AP01891 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-AP01891 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.6■□□□□ 0.73
HLA-AP01891 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
HLA-AP01891 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.6■□□□□ 0.73
HLA-AP01891 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
HLA-AP01891 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-AP01891 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
HLA-AP01891 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.59■□□□□ 0.73
HLA-AP01891 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.59■□□□□ 0.73
HLA-AP01891 DUX4L11-201ENST00000611504 1267 ntBASIC19.59■□□□□ 0.73
HLA-AP01891 DUX4L12-201ENST00000614593 1267 ntBASIC19.59■□□□□ 0.73
HLA-AP01891 DUX4L14-201ENST00000621227 1267 ntBASIC19.59■□□□□ 0.73
HLA-AP01891 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
HLA-AP01891 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-AP01891 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.59■□□□□ 0.73
HLA-AP01891 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-AP01891 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms