Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SNAI2O43623 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNAI2O43623 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC17.38■□□□□ 0.37
SNAI2O43623 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNAI2O43623 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC17.38■□□□□ 0.37
SNAI2O43623 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNAI2O43623 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNAI2O43623 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNAI2O43623 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNAI2O43623 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SNAI2O43623 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNAI2O43623 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNAI2O43623 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNAI2O43623 HGH1-207ENST00000628266 258 ntTSL 5 BASIC17.37■□□□□ 0.37
SNAI2O43623 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNAI2O43623 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC17.37■□□□□ 0.37
SNAI2O43623 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNAI2O43623 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNAI2O43623 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNAI2O43623 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNAI2O43623 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNAI2O43623 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SNAI2O43623 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC17.36■□□□□ 0.37
SNAI2O43623 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SNAI2O43623 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SNAI2O43623 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
SNAI2O43623 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC17.36■□□□□ 0.37
SNAI2O43623 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SNAI2O43623 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNAI2O43623 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC17.36■□□□□ 0.37
SNAI2O43623 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SNAI2O43623 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SNAI2O43623 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNAI2O43623 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC17.35■□□□□ 0.37
SNAI2O43623 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SNAI2O43623 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNAI2O43623 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNAI2O43623 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC17.35■□□□□ 0.37
SNAI2O43623 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SNAI2O43623 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNAI2O43623 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNAI2O43623 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNAI2O43623 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SNAI2O43623 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
SNAI2O43623 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNAI2O43623 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SNAI2O43623 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SNAI2O43623 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNAI2O43623 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC17.34■□□□□ 0.37
SNAI2O43623 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SNAI2O43623 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC17.34■□□□□ 0.37
SNAI2O43623 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SNAI2O43623 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNAI2O43623 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC17.33■□□□□ 0.37
SNAI2O43623 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC17.33■□□□□ 0.37
SNAI2O43623 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SNAI2O43623 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
SNAI2O43623 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SNAI2O43623 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SNAI2O43623 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
SNAI2O43623 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNAI2O43623 HLA-V-202ENST00000446817 847 ntBASIC17.33■□□□□ 0.36
SNAI2O43623 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC17.33■□□□□ 0.36
SNAI2O43623 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNAI2O43623 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SNAI2O43623 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
SNAI2O43623 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC17.33■□□□□ 0.36
SNAI2O43623 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SNAI2O43623 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNAI2O43623 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SNAI2O43623 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC17.32■□□□□ 0.36
SNAI2O43623 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC17.32■□□□□ 0.36
SNAI2O43623 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SNAI2O43623 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.32■□□□□ 0.36
SNAI2O43623 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SNAI2O43623 MED25-210ENST00000612854 801 ntTSL 5 BASIC17.32■□□□□ 0.36
SNAI2O43623 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SNAI2O43623 MED25-214ENST00000622402 642 ntTSL 5 BASIC17.32■□□□□ 0.36
SNAI2O43623 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC17.32■□□□□ 0.36
SNAI2O43623 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNAI2O43623 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SNAI2O43623 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SNAI2O43623 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNAI2O43623 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNAI2O43623 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SNAI2O43623 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNAI2O43623 DUX4L11-201ENST00000611504 1267 ntBASIC17.31■□□□□ 0.36
SNAI2O43623 DUX4L12-201ENST00000614593 1267 ntBASIC17.31■□□□□ 0.36
SNAI2O43623 DUX4L14-201ENST00000621227 1267 ntBASIC17.31■□□□□ 0.36
SNAI2O43623 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SNAI2O43623 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNAI2O43623 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SNAI2O43623 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SNAI2O43623 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNAI2O43623 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNAI2O43623 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNAI2O43623 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC17.3■□□□□ 0.36
SNAI2O43623 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SNAI2O43623 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNAI2O43623 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms