Protein–RNA interactions for Protein: Q86XP3

DDX42, ATP-dependent RNA helicase DDX42, humanhuman

Known RBP eCLIP

Length 938 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42Q86XP3 SRSF6-201ENST00000244020 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.792e-10■■■■■ 33.6
DDX42Q86XP3 MAN2A2-229ENST00000561240 460 ntTSL 418.31■□□□□ 0.521e-6■■■■■ 32.8
DDX42Q86XP3 MAN2A2-224ENST00000560616 988 ntTSL 517.12■□□□□ 0.331e-6■■■■■ 32.8
DDX42Q86XP3 MAN2A2-205ENST00000558171 790 ntTSL 515.89■□□□□ 0.131e-6■■■■■ 32.8
DDX42Q86XP3 MAN2A2-220ENST00000560192 2469 ntTSL 1 (best)14.23□□□□□ -0.131e-6■■■■■ 32.8
DDX42Q86XP3 MAN2A2-222ENST00000560505 643 ntTSL 213.68□□□□□ -0.221e-6■■■■■ 32.8
DDX42Q86XP3 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.064e-18■■■■■ 32.5
DDX42Q86XP3 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.024e-18■■■■■ 32.5
DDX42Q86XP3 SYCP2L-202ENST00000341041 3069 ntTSL 212.79□□□□□ -0.364e-18■■■■■ 32.5
DDX42Q86XP3 AC079781.5-201ENST00000641390 3211 nt20.15■□□□□ 0.821e-7■■■■■ 32.4
DDX42Q86XP3 AC079781.5-203ENST00000641315 2059 nt19.52■□□□□ 0.721e-7■■■■■ 32.4
DDX42Q86XP3 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.361e-7■■■■■ 32.4
DDX42Q86XP3 AC079781.5-202ENST00000641784 3743 ntBASIC16.15■□□□□ 0.181e-7■■■■■ 32.4
DDX42Q86XP3 ASNS-202ENST00000394308 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.671e-7■■■■■ 32.4
DDX42Q86XP3 ASNS-205ENST00000422745 1865 ntTSL 5 BASIC10.31□□□□□ -0.761e-7■■■■■ 32.4
DDX42Q86XP3 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC7.8□□□□□ -1.161e-7■■■■■ 32.4
DDX42Q86XP3 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.85□□□□□ -1.311e-7■■■■■ 32.4
DDX42Q86XP3 RPL18-211ENST00000550973 1111 ntTSL 521.64■■□□□ 1.056e-7■■■■■ 32.2
DDX42Q86XP3 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.38■■□□□ 1.016e-7■■■■■ 32.2
DDX42Q86XP3 ARID4B-208ENST00000466653 2315 ntTSL 218.82■□□□□ 0.66e-7■■■■■ 32.2
DDX42Q86XP3 RPL18-212ENST00000551749 2091 ntTSL 218.72■□□□□ 0.596e-7■■■■■ 32.2
DDX42Q86XP3 RPL18-213ENST00000552347 1645 ntTSL 518.6■□□□□ 0.576e-7■■■■■ 32.2
DDX42Q86XP3 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.25■□□□□ 0.516e-7■■■■■ 32.2
DDX42Q86XP3 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.25■□□□□ 0.516e-7■■■■■ 32.2
DDX42Q86XP3 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.516e-7■■■■■ 32.2
DDX42Q86XP3 ARID4B-204ENST00000418304 1759 ntTSL 518.1■□□□□ 0.496e-7■■■■■ 32.2
DDX42Q86XP3 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.436e-7■■■■■ 32.2
DDX42Q86XP3 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.69■□□□□ 0.426e-7■■■■■ 32.2
DDX42Q86XP3 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC17.22■□□□□ 0.356e-7■■■■■ 32.2
DDX42Q86XP3 RPL18-206ENST00000549370 628 ntTSL 517.02■□□□□ 0.326e-7■■■■■ 32.2
DDX42Q86XP3 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.62■□□□□ 0.256e-7■■■■■ 32.2
DDX42Q86XP3 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.246e-7■■■■■ 32.2
DDX42Q86XP3 ARID4B-207ENST00000462969 273 ntTSL 215.31■□□□□ 0.046e-7■■■■■ 32.2
DDX42Q86XP3 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.016e-7■■■■■ 32.2
DDX42Q86XP3 RPL18-204ENST00000547897 440 ntTSL 514.58□□□□□ -0.086e-7■■■■■ 32.2
DDX42Q86XP3 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC13.89□□□□□ -0.196e-7■■■■■ 32.2
DDX42Q86XP3 RPL18-215ENST00000552705 1081 ntTSL 213.68□□□□□ -0.226e-7■■■■■ 32.2
DDX42Q86XP3 RPL18-210ENST00000550671 764 ntTSL 213.51□□□□□ -0.256e-7■■■■■ 32.2
DDX42Q86XP3 RPL18-203ENST00000547892 3844 nt13.08□□□□□ -0.326e-7■■■■■ 32.2
DDX42Q86XP3 RPL18-216ENST00000552851 691 ntTSL 513.01□□□□□ -0.336e-7■■■■■ 32.2
DDX42Q86XP3 ARID4B-212ENST00000491632 3823 ntTSL 1 (best)12.58□□□□□ -0.46e-7■■■■■ 32.2
DDX42Q86XP3 ARID4B-205ENST00000421364 5151 ntTSL 1 (best)12.58□□□□□ -0.46e-7■■■■■ 32.2
DDX42Q86XP3 DYNC1H1-201ENST00000360184 14333 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.616e-7■■■■■ 32.2
DDX42Q86XP3 MBNL2-206ENST00000469707 2574 ntTSL 1 (best)8.67□□□□□ -1.026e-7■■■■■ 32.2
DDX42Q86XP3 MGEA5-204ENST00000429860 769 ntTSL 38.4□□□□□ -1.066e-7■■■■■ 32.2
DDX42Q86XP3 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC7.12□□□□□ -1.276e-7■■■■■ 32.2
DDX42Q86XP3 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.36e-7■■■■■ 32.2
DDX42Q86XP3 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.55□□□□□ -1.366e-7■■■■■ 32.2
DDX42Q86XP3 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.96□□□□□ -1.466e-7■■■■■ 32.2
DDX42Q86XP3 VEGFA-216ENST00000512683 475 ntTSL 1 (best)13.43□□□□□ -0.263e-10■■■■■ 30.6
DDX42Q86XP3 CYBRD1-207ENST00000494587 549 ntTSL 418.69■□□□□ 0.584e-6■■■■■ 30.2
DDX42Q86XP3 CYBRD1-205ENST00000468308 763 ntTSL 316.65■□□□□ 0.264e-6■■■■■ 30.2
DDX42Q86XP3 CYBRD1-206ENST00000474182 465 ntTSL 515.97■□□□□ 0.154e-6■■■■■ 30.2
DDX42Q86XP3 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC13.85□□□□□ -0.194e-6■■■■■ 30.2
DDX42Q86XP3 CAD-201ENST00000264705 7265 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.354e-6■■■■■ 30.2
DDX42Q86XP3 ROR2-201ENST00000375708 4096 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.364e-6■■■■■ 30.2
DDX42Q86XP3 CYBRD1-202ENST00000375252 3540 ntTSL 1 (best) BASIC12.65□□□□□ -0.384e-6■■■■■ 30.2
DDX42Q86XP3 CAD-206ENST00000464159 589 ntTSL 311.04□□□□□ -0.644e-6■■■■■ 30.2
DDX42Q86XP3 CYBRD1-201ENST00000321348 4365 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.664e-6■■■■■ 30.2
DDX42Q86XP3 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC7.17□□□□□ -1.264e-6■■■■■ 30.2
DDX42Q86XP3 ROR2-203ENST00000476440 316 ntTSL 56.58□□□□□ -1.364e-6■■■■■ 30.2
DDX42Q86XP3 ZYX-207ENST00000457235 703 ntTSL 427.02■■□□□ 1.922e-6■■■■■ 29.9
DDX42Q86XP3 EZH2-210ENST00000498186 1876 ntTSL 225.87■■□□□ 1.732e-6■■■■■ 29.9
DDX42Q86XP3 EZH2-207ENST00000483012 1491 ntTSL 225.77■■□□□ 1.722e-6■■■■■ 29.9
DDX42Q86XP3 EDEM1-206ENST00000465369 1956 ntTSL 525.09■■□□□ 1.612e-6■■■■■ 29.9
DDX42Q86XP3 NFE2L2-205ENST00000430047 451 ntTSL 324.68■■□□□ 1.542e-6■■■■■ 29.9
DDX42Q86XP3 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.63■■□□□ 1.372e-6■■■■■ 29.9
DDX42Q86XP3 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.372e-6■■■■■ 29.9
DDX42Q86XP3 ZYX-208ENST00000468083 1146 ntTSL 522.97■■□□□ 1.272e-6■■■■■ 29.9
DDX42Q86XP3 EDEM1-205ENST00000465187 585 ntTSL 422.84■■□□□ 1.252e-6■■■■■ 29.9
DDX42Q86XP3 MAP1LC3B-206ENST00000564844 3085 ntTSL 1 (best)22.72■■□□□ 1.232e-6■■■■■ 29.9
DDX42Q86XP3 EDEM1-203ENST00000443790 730 ntTSL 221.11■□□□□ 0.972e-6■■■■■ 29.9
DDX42Q86XP3 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.71■□□□□ 0.752e-6■■■■■ 29.9
DDX42Q86XP3 ZYX-206ENST00000449630 533 ntTSL 419.52■□□□□ 0.722e-6■■■■■ 29.9
DDX42Q86XP3 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.692e-6■■■■■ 29.9
DDX42Q86XP3 ZSWIM8-204ENST00000431225 1687 ntTSL 518.55■□□□□ 0.562e-6■■■■■ 29.9
DDX42Q86XP3 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.46■□□□□ 0.552e-6■■■■■ 29.9
DDX42Q86XP3 MAP1LC3B-208ENST00000570189 1259 ntTSL 1 (best)18.14■□□□□ 0.492e-6■■■■■ 29.9
DDX42Q86XP3 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC17.35■□□□□ 0.372e-6■■■■■ 29.9
DDX42Q86XP3 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.362e-6■■■■■ 29.9
DDX42Q86XP3 NFE2L2-210ENST00000462023 521 ntTSL 216.48■□□□□ 0.232e-6■■■■■ 29.9
DDX42Q86XP3 ZYX-202ENST00000354434 2050 ntAPPRIS ALT2 TSL 216.03■□□□□ 0.162e-6■■■■■ 29.9
DDX42Q86XP3 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.052e-6■■■■■ 29.9
DDX42Q86XP3 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC15.28■□□□□ 0.042e-6■■■■■ 29.9
DDX42Q86XP3 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.032e-6■■■■■ 29.9
DDX42Q86XP3 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.042e-6■■■■■ 29.9
DDX42Q86XP3 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC14.69□□□□□ -0.062e-6■■■■■ 29.9
DDX42Q86XP3 ZYX-203ENST00000392910 2123 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.142e-6■■■■■ 29.9
DDX42Q86XP3 EDEM1-202ENST00000434243 978 ntTSL 214.12□□□□□ -0.152e-6■■■■■ 29.9
DDX42Q86XP3 AKNA-201ENST00000223791 4414 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.192e-6■■■■■ 29.9
DDX42Q86XP3 AKNA-202ENST00000307564 7380 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.32e-6■■■■■ 29.9
DDX42Q86XP3 NFE2L2-211ENST00000464747 2749 ntTSL 2 BASIC11.47□□□□□ -0.572e-6■■■■■ 29.9
DDX42Q86XP3 ZYX-209ENST00000477373 504 ntTSL 411.18□□□□□ -0.622e-6■■■■■ 29.9
DDX42Q86XP3 NFE2L2-214ENST00000588123 814 ntTSL 59.94□□□□□ -0.822e-6■■■■■ 29.9
DDX42Q86XP3 MAP1LC3B-205ENST00000564638 735 ntTSL 27.82□□□□□ -1.162e-6■■■■■ 29.9
DDX42Q86XP3 NFE2L2-213ENST00000586532 942 ntTSL 55.94□□□□□ -1.462e-6■■■■■ 29.9
DDX42Q86XP3 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.63□□□□□ -1.354e-6■■■■■ 29.4
DDX42Q86XP3 FP671120.1-201ENST00000623664 2498 ntTSL 2 BASIC13.27□□□□□ -0.296e-10■■■■■ 29.2
DDX42Q86XP3 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.672e-6■■■■■ 28.5
DDX42Q86XP3 HNRNPK-206ENST00000457156 1283 ntTSL 519.08■□□□□ 0.642e-6■■■■■ 28.5
Retrieved 100 of 2,477 protein–RNA pairs in 14.4 ms