RNA–Protein interactions for RNA: ENST00000552705.5

RPL18-215, Transcript of ribosomal protein L18, humanhuman

TSL 2

Gene RPL18, Length 1,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL18-215ENST00000552705 NISCHQ9Y2I1 1504 aa31.75■■■□□ 2.67
RPL18-215ENST00000552705 CCDC180Q9P1Z9 1646 aa28.14■■■□□ 2.1
RPL18-215ENST00000552705 ABCC9O60706 1549 aa27.24■■□□□ 1.95
RPL18-215ENST00000552705 ZCCHC6Q5VYS8 1495 aaKnown RBP26.49■■□□□ 1.83
RPL18-215ENST00000552705 NACADO15069 1562 aa26.36■■□□□ 1.81
RPL18-215ENST00000552705 RB1CC1Q8TDY2 1594 aa26.31■■□□□ 1.8
RPL18-215ENST00000552705 MYO15BQ96JP2 1530 aa26.3■■□□□ 1.8
RPL18-215ENST00000552705 DCAF1Q9Y4B6 1507 aa26.28■■□□□ 1.8
RPL18-215ENST00000552705 DCAF8L2P0C7V8 631 aa26.25■■□□□ 1.79
RPL18-215ENST00000552705 UNC13AQ9UPW8 1703 aa25.9■■□□□ 1.74
RPL18-215ENST00000552705 SCRIBQ14160 1630 aa25.65■■□□□ 1.7
RPL18-215ENST00000552705 BICRAQ9NZM4 1560 aa25.64■■□□□ 1.69
RPL18-215ENST00000552705 PABPN1Q86U42 306 aaKnown RBP eCLIP25.48■■□□□ 1.67
RPL18-215ENST00000552705 SHROOM4Q9ULL8 1493 aa25.26■■□□□ 1.63
RPL18-215ENST00000552705 DNAJC5BQ9UF47 199 aa24.89■■□□□ 1.58
RPL18-215ENST00000552705 EIF4G1Q04637 1599 aaKnown RBP24.85■■□□□ 1.57
RPL18-215ENST00000552705 CECR2Q9BXF3 1484 aa24.72■■□□□ 1.55
RPL18-215ENST00000552705 CC2D2AQ9P2K1 1620 aa24.71■■□□□ 1.55
RPL18-215ENST00000552705 SMARCA4P51532 1647 aa24.59■■□□□ 1.53
RPL18-215ENST00000552705 BAZ1AQ9NRL2 1556 aaPredicted RBP24.54■■□□□ 1.52
RPL18-215ENST00000552705 MROH2BQ7Z745 1585 aa24.49■■□□□ 1.51
RPL18-215ENST00000552705 PEG3Q9GZU2 1588 aa24.37■■□□□ 1.49
RPL18-215ENST00000552705 ATAD2BQ9ULI0 1458 aa24.37■■□□□ 1.49
RPL18-215ENST00000552705 NCAPD3P42695 1498 aa24.33■■□□□ 1.49
RPL18-215ENST00000552705 SMARCA2P51531 1590 aa24.33■■□□□ 1.48
RPL18-215ENST00000552705 RSF1Q96T23 1441 aaPredicted RBP24.27■■□□□ 1.48
RPL18-215ENST00000552705 WIZO95785 1651 aa24.25■■□□□ 1.47
RPL18-215ENST00000552705 HMGXB3Q12766 1538 aa24.23■■□□□ 1.47
RPL18-215ENST00000552705 BAZ1BQ9UIG0 1483 aaKnown RBP24.13■■□□□ 1.45
RPL18-215ENST00000552705 TOP2AP11388 1531 aaKnown RBP23.95■■□□□ 1.43
RPL18-215ENST00000552705 SUPT5HO00267 1087 aaKnown RBP23.7■■□□□ 1.38
RPL18-215ENST00000552705 NESP48681 1621 aa23.7■■□□□ 1.38
RPL18-215ENST00000552705 CCDC88BA6NC98 1476 aa23.68■■□□□ 1.38
RPL18-215ENST00000552705 LAMC3Q9Y6N6 1575 aa23.64■■□□□ 1.37
RPL18-215ENST00000552705 CADPSQ9ULU8 1353 aa23.59■■□□□ 1.37
RPL18-215ENST00000552705 CFTRP13569 1480 aa23.54■■□□□ 1.36
RPL18-215ENST00000552705 KIF21AQ7Z4S6 1674 aa23.47■■□□□ 1.35
RPL18-215ENST00000552705 PRDM2Q13029 1718 aa23.47■■□□□ 1.35
RPL18-215ENST00000552705 PDS5BQ9NTI5 1447 aa23.41■■□□□ 1.34
RPL18-215ENST00000552705 ERCC6Q03468 1493 aa23.38■■□□□ 1.33
RPL18-215ENST00000552705 FANCD2Q9BXW9 1451 aa23.32■■□□□ 1.32
RPL18-215ENST00000552705 THOC2Q8NI27 1593 aaKnown RBP23.31■■□□□ 1.32
RPL18-215ENST00000552705 CEP164Q9UPV0 1460 aa23.25■■□□□ 1.31
RPL18-215ENST00000552705 MRC2Q9UBG0 1479 aa23.19■■□□□ 1.3
RPL18-215ENST00000552705 WDR62O43379 1518 aa23.15■■□□□ 1.3
RPL18-215ENST00000552705 URB2Q14146 1524 aaKnown RBP23.13■■□□□ 1.29
RPL18-215ENST00000552705 CUX2O14529 1486 aa23.12■■□□□ 1.29
RPL18-215ENST00000552705 TOPBP1Q92547 1522 aa23.01■■□□□ 1.27
RPL18-215ENST00000552705 DNMBPQ6XZF7 1577 aa23■■□□□ 1.27
RPL18-215ENST00000552705 ABCC8Q09428 1581 aa22.97■■□□□ 1.27
RPL18-215ENST00000552705 CUX1P39880 1505 aa22.96■■□□□ 1.27
RPL18-215ENST00000552705 BIVM-ERCC5R4GMW8 1640 aa22.83■■□□□ 1.25
RPL18-215ENST00000552705 SYNJ1O43426 1573 aa22.83■■□□□ 1.25
RPL18-215ENST00000552705 POLA1P09884 1462 aaPredicted RBP22.82■■□□□ 1.24
RPL18-215ENST00000552705 TOP2BQ02880 1626 aa22.81■■□□□ 1.24
RPL18-215ENST00000552705 TARBP1Q13395 1621 aaKnown RBP22.81■■□□□ 1.24
RPL18-215ENST00000552705 WRNQ14191 1432 aaPredicted RBP eCLIP22.81■■□□□ 1.241e-7■■■■■ 66.8
RPL18-215ENST00000552705 FGD5Q6ZNL6 1462 aa22.79■■□□□ 1.24
RPL18-215ENST00000552705 IFT140Q96RY7 1462 aa22.76■■□□□ 1.23
RPL18-215ENST00000552705 RAD54L2Q9Y4B4 1467 aa22.73■■□□□ 1.23
RPL18-215ENST00000552705 SOGA1O94964 1423 aa22.7■■□□□ 1.22
RPL18-215ENST00000552705 ZNF608Q9ULD9 1512 aaPredicted RBP22.7■■□□□ 1.22
RPL18-215ENST00000552705 WDR97A6NE52 1622 aa22.69■■□□□ 1.22
RPL18-215ENST00000552705 EIF4G3O43432 1585 aaKnown RBP22.62■■□□□ 1.21
RPL18-215ENST00000552705 ABCA10Q8WWZ4 1543 aa22.59■■□□□ 1.21
RPL18-215ENST00000552705 AQRO60306 1485 aaKnown RBP eCLIP22.57■■□□□ 1.26e-8■■■■■ 50
RPL18-215ENST00000552705 TDRD9Q8NDG6 1382 aaKnown RBP22.54■■□□□ 1.2
RPL18-215ENST00000552705 ABCA5Q8WWZ7 1642 aa22.53■■□□□ 1.2
RPL18-215ENST00000552705 PBRM1Q86U86 1689 aa22.46■■□□□ 1.19
RPL18-215ENST00000552705 GAPVD1Q14C86 1478 aa22.45■■□□□ 1.18
RPL18-215ENST00000552705 GRIN2BQ13224 1484 aa22.41■■□□□ 1.18
RPL18-215ENST00000552705 TRIM41Q8WV44 630 aa22.36■■□□□ 1.17
RPL18-215ENST00000552705 SNAPC4Q5SXM2 1469 aa22.35■■□□□ 1.17
RPL18-215ENST00000552705 CHD1O14646 1710 aa22.34■■□□□ 1.17
RPL18-215ENST00000552705 CHIC1Q5VXU3 224 aa22.33■■□□□ 1.17
RPL18-215ENST00000552705 MAGI1Q96QZ7 1491 aaPredicted RBP22.33■■□□□ 1.16
RPL18-215ENST00000552705 ERICH3Q5RHP9 1530 aa22.31■■□□□ 1.16
RPL18-215ENST00000552705 KIF27Q86VH2 1401 aa22.3■■□□□ 1.16
RPL18-215ENST00000552705 RUSC2Q8N2Y8 1516 aa22.27■■□□□ 1.16
RPL18-215ENST00000552705 ADAMTS12P58397 1594 aa22.27■■□□□ 1.16
RPL18-215ENST00000552705 SYNJ2O15056 1496 aa22.24■■□□□ 1.15
RPL18-215ENST00000552705 IGF1RP08069 1367 aa22.24■■□□□ 1.15
RPL18-215ENST00000552705 FHAD1B1AJZ9 1412 aa22.19■■□□□ 1.14
RPL18-215ENST00000552705 CUL7Q14999 1698 aa22.17■■□□□ 1.14
RPL18-215ENST00000552705 OSCARQ8IYS5 282 aa22.16■■□□□ 1.14
RPL18-215ENST00000552705 DNAJC5Q9H3Z4 198 aa22.16■■□□□ 1.14
RPL18-215ENST00000552705 GRIN2AQ12879 1464 aa22.14■■□□□ 1.13
RPL18-215ENST00000552705 FBLN2P98095 1184 aa22.13■■□□□ 1.13
RPL18-215ENST00000552705 CHMP7Q8WUX9 453 aaPredicted RBP22.13■■□□□ 1.13
RPL18-215ENST00000552705 CLASP1Q7Z460 1538 aa22.07■■□□□ 1.12
RPL18-215ENST00000552705 CARMIL1Q5VZK9 1371 aa22.07■■□□□ 1.12
RPL18-215ENST00000552705 CEP170Q5SW79 1584 aa22.07■■□□□ 1.12
RPL18-215ENST00000552705 NUP160Q12769 1436 aa22.06■■□□□ 1.12
RPL18-215ENST00000552705 EEA1Q15075 1411 aa22.01■■□□□ 1.11
RPL18-215ENST00000552705 PRXQ9BXM0 1461 aa22■■□□□ 1.11
RPL18-215ENST00000552705 RAPGEF2Q9Y4G8 1499 aa21.96■■□□□ 1.11
RPL18-215ENST00000552705 CSRNP3Q8WYN3 585 aa21.96■■□□□ 1.11
RPL18-215ENST00000552705 SHROOM2Q13796 1616 aa21.91■■□□□ 1.1
RPL18-215ENST00000552705 FAM9AQ8IZU1 332 aaPredicted RBP21.9■■□□□ 1.1
RPL18-215ENST00000552705 RIMBP3CA6NJZ7 1639 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms