RNA–Protein interactions for RNA: ENST00000549370.5

RPL18-206, Transcript of ribosomal protein L18, humanhuman

TSL 5

Gene RPL18, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL18-206ENST00000549370 NISCHQ9Y2I1 1504 aa39.54■■■■□ 3.92
RPL18-206ENST00000549370 CCDC180Q9P1Z9 1646 aa35.2■■■■□ 3.23
RPL18-206ENST00000549370 ABCC9O60706 1549 aa34.62■■■■□ 3.13
RPL18-206ENST00000549370 RB1CC1Q8TDY2 1594 aa33.19■■■□□ 2.9
RPL18-206ENST00000549370 NACADO15069 1562 aa33.13■■■□□ 2.89
RPL18-206ENST00000549370 DCAF8L2P0C7V8 631 aa32.94■■■□□ 2.86
RPL18-206ENST00000549370 ZCCHC6Q5VYS8 1495 aaKnown RBP32.92■■■□□ 2.86
RPL18-206ENST00000549370 MYO15BQ96JP2 1530 aa32.92■■■□□ 2.86
RPL18-206ENST00000549370 DCAF1Q9Y4B6 1507 aa32.71■■■□□ 2.83
RPL18-206ENST00000549370 UNC13AQ9UPW8 1703 aa32.48■■■□□ 2.79
RPL18-206ENST00000549370 PABPN1Q86U42 306 aaKnown RBP eCLIP32.31■■■□□ 2.76
RPL18-206ENST00000549370 BICRAQ9NZM4 1560 aa32.31■■■□□ 2.76
RPL18-206ENST00000549370 SCRIBQ14160 1630 aa32.1■■■□□ 2.73
RPL18-206ENST00000549370 DNAJC5BQ9UF47 199 aa32.03■■■□□ 2.72
RPL18-206ENST00000549370 SHROOM4Q9ULL8 1493 aa31.87■■■□□ 2.69
RPL18-206ENST00000549370 EIF4G1Q04637 1599 aaKnown RBP31.41■■■□□ 2.62
RPL18-206ENST00000549370 CC2D2AQ9P2K1 1620 aa31.32■■■□□ 2.6
RPL18-206ENST00000549370 CECR2Q9BXF3 1484 aa31.13■■■□□ 2.57
RPL18-206ENST00000549370 SMARCA4P51532 1647 aa30.71■■■□□ 2.51
RPL18-206ENST00000549370 NCAPD3P42695 1498 aa30.61■■■□□ 2.49
RPL18-206ENST00000549370 BAZ1AQ9NRL2 1556 aaPredicted RBP30.61■■■□□ 2.49
RPL18-206ENST00000549370 ATAD2BQ9ULI0 1458 aa30.6■■■□□ 2.49
RPL18-206ENST00000549370 SMARCA2P51531 1590 aa30.49■■■□□ 2.47
RPL18-206ENST00000549370 MROH2BQ7Z745 1585 aa30.49■■■□□ 2.47
RPL18-206ENST00000549370 PEG3Q9GZU2 1588 aa30.44■■■□□ 2.46
RPL18-206ENST00000549370 HMGXB3Q12766 1538 aa30.43■■■□□ 2.46
RPL18-206ENST00000549370 BAZ1BQ9UIG0 1483 aaKnown RBP30.28■■■□□ 2.44
RPL18-206ENST00000549370 WIZO95785 1651 aa30.12■■■□□ 2.41
RPL18-206ENST00000549370 RSF1Q96T23 1441 aaPredicted RBP30.06■■■□□ 2.4
RPL18-206ENST00000549370 NESP48681 1621 aa29.95■■■□□ 2.38
RPL18-206ENST00000549370 TOP2AP11388 1531 aaKnown RBP29.79■■■□□ 2.36
RPL18-206ENST00000549370 LAMC3Q9Y6N6 1575 aa29.78■■■□□ 2.36
RPL18-206ENST00000549370 ERCC6Q03468 1493 aa29.78■■■□□ 2.36
RPL18-206ENST00000549370 CADPSQ9ULU8 1353 aa29.68■■■□□ 2.34
RPL18-206ENST00000549370 CUX2O14529 1486 aa29.6■■■□□ 2.33
RPL18-206ENST00000549370 PDS5BQ9NTI5 1447 aa29.56■■■□□ 2.32
RPL18-206ENST00000549370 KIF21AQ7Z4S6 1674 aa29.55■■■□□ 2.32
RPL18-206ENST00000549370 THOC2Q8NI27 1593 aaKnown RBP29.54■■■□□ 2.32
RPL18-206ENST00000549370 CFTRP13569 1480 aa29.49■■■□□ 2.31
RPL18-206ENST00000549370 CCDC88BA6NC98 1476 aa29.44■■■□□ 2.3
RPL18-206ENST00000549370 FANCD2Q9BXW9 1451 aa29.33■■■□□ 2.29
RPL18-206ENST00000549370 MRC2Q9UBG0 1479 aa29.31■■■□□ 2.28
RPL18-206ENST00000549370 CEP164Q9UPV0 1460 aa29.29■■■□□ 2.28
RPL18-206ENST00000549370 WDR62O43379 1518 aa29.25■■■□□ 2.27
RPL18-206ENST00000549370 PRDM2Q13029 1718 aa29.2■■■□□ 2.26
RPL18-206ENST00000549370 URB2Q14146 1524 aaKnown RBP29.1■■■□□ 2.25
RPL18-206ENST00000549370 SUPT5HO00267 1087 aaKnown RBP29.05■■■□□ 2.24
RPL18-206ENST00000549370 DNAJC5Q9H3Z4 198 aa28.92■■■□□ 2.22
RPL18-206ENST00000549370 TOPBP1Q92547 1522 aa28.87■■■□□ 2.21
RPL18-206ENST00000549370 DNMBPQ6XZF7 1577 aa28.8■■■□□ 2.2
RPL18-206ENST00000549370 ABCC8Q09428 1581 aa28.78■■■□□ 2.2
RPL18-206ENST00000549370 IFT140Q96RY7 1462 aa28.7■■■□□ 2.18
RPL18-206ENST00000549370 ZNF608Q9ULD9 1512 aaPredicted RBP28.64■■■□□ 2.18
RPL18-206ENST00000549370 POLA1P09884 1462 aaPredicted RBP28.62■■■□□ 2.17
RPL18-206ENST00000549370 CUX1P39880 1505 aa28.61■■■□□ 2.17
RPL18-206ENST00000549370 TARBP1Q13395 1621 aaKnown RBP28.59■■■□□ 2.17
RPL18-206ENST00000549370 FGD5Q6ZNL6 1462 aa28.51■■■□□ 2.15
RPL18-206ENST00000549370 RAD54L2Q9Y4B4 1467 aa28.5■■■□□ 2.15
RPL18-206ENST00000549370 EIF4G3O43432 1585 aaKnown RBP28.5■■■□□ 2.15
RPL18-206ENST00000549370 SOGA1O94964 1423 aa28.44■■■□□ 2.14
RPL18-206ENST00000549370 AQRO60306 1485 aaKnown RBP eCLIP28.43■■■□□ 2.145e-8■■■■■ 45.6
RPL18-206ENST00000549370 TDRD9Q8NDG6 1382 aaKnown RBP28.34■■■□□ 2.13
RPL18-206ENST00000549370 WDR97A6NE52 1622 aa28.32■■■□□ 2.12
RPL18-206ENST00000549370 SYNJ1O43426 1573 aa28.29■■■□□ 2.12
RPL18-206ENST00000549370 WRNQ14191 1432 aaPredicted RBP eCLIP28.29■■■□□ 2.121e-7■■■■■ 66.8
RPL18-206ENST00000549370 BIVM-ERCC5R4GMW8 1640 aa28.29■■■□□ 2.12
RPL18-206ENST00000549370 OSCARQ8IYS5 282 aa28.28■■■□□ 2.12
RPL18-206ENST00000549370 TOP2BQ02880 1626 aa28.28■■■□□ 2.12
RPL18-206ENST00000549370 ABCA10Q8WWZ4 1543 aa28.23■■■□□ 2.11
RPL18-206ENST00000549370 SNAPC4Q5SXM2 1469 aa28.15■■■□□ 2.1
RPL18-206ENST00000549370 ABCA5Q8WWZ7 1642 aa28.15■■■□□ 2.1
RPL18-206ENST00000549370 CHD1O14646 1710 aa28.15■■■□□ 2.1
RPL18-206ENST00000549370 GRIN2BQ13224 1484 aa28.15■■■□□ 2.1
RPL18-206ENST00000549370 GAPVD1Q14C86 1478 aa28.12■■■□□ 2.09
RPL18-206ENST00000549370 MAGI1Q96QZ7 1491 aaPredicted RBP28.09■■■□□ 2.09
RPL18-206ENST00000549370 PBRM1Q86U86 1689 aa28.07■■■□□ 2.08
RPL18-206ENST00000549370 FBLN2P98095 1184 aa28■■■□□ 2.07
RPL18-206ENST00000549370 SYNJ2O15056 1496 aa28■■■□□ 2.07
RPL18-206ENST00000549370 RIMBP3CA6NJZ7 1639 aa27.92■■■□□ 2.06
RPL18-206ENST00000549370 RIMBP3BA6NNM3 1639 aa27.92■■■□□ 2.06
RPL18-206ENST00000549370 RIMBP3Q9UFD9 1639 aa27.92■■■□□ 2.06
RPL18-206ENST00000549370 CHMP7Q8WUX9 453 aaPredicted RBP27.92■■■□□ 2.06
RPL18-206ENST00000549370 ARHGEF11O15085 1522 aa27.9■■■□□ 2.06
RPL18-206ENST00000549370 CLASP1Q7Z460 1538 aa27.9■■■□□ 2.06
RPL18-206ENST00000549370 ADAMTS12P58397 1594 aa27.89■■■□□ 2.05
RPL18-206ENST00000549370 ERICH3Q5RHP9 1530 aa27.87■■■□□ 2.05
RPL18-206ENST00000549370 TRIM41Q8WV44 630 aa27.81■■■□□ 2.04
RPL18-206ENST00000549370 GRIN2AQ12879 1464 aa27.8■■■□□ 2.04
RPL18-206ENST00000549370 FHAD1B1AJZ9 1412 aa27.79■■■□□ 2.04
RPL18-206ENST00000549370 NUP160Q12769 1436 aa27.72■■■□□ 2.03
RPL18-206ENST00000549370 CEP170Q5SW79 1584 aa27.7■■■□□ 2.03
RPL18-206ENST00000549370 ARAP1Q96P48 1450 aa27.7■■■□□ 2.02
RPL18-206ENST00000549370 KIF27Q86VH2 1401 aa27.68■■■□□ 2.02
RPL18-206ENST00000549370 IGF1RP08069 1367 aa27.67■■■□□ 2.02
RPL18-206ENST00000549370 CYB5RLQ6IPT4 315 aa27.58■■■□□ 2.01
RPL18-206ENST00000549370 CUL7Q14999 1698 aa27.55■■■□□ 2
RPL18-206ENST00000549370 SHROOM2Q13796 1616 aa27.53■■■□□ 2
RPL18-206ENST00000549370 ERCC6L2Q5T890 1561 aa27.52■■■□□ 2
RPL18-206ENST00000549370 RUSC2Q8N2Y8 1516 aa27.48■■□□□ 1.99
RPL18-206ENST00000549370 CARMIL1Q5VZK9 1371 aa27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms