Protein–RNA interactions for Protein: P52756

RBM5, RNA-binding protein 5, humanhuman

Known RBP eCLIP

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM5P52756 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.433e-10■■■■■ 45.8
RBM5P52756 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC17.69■□□□□ 0.423e-10■■■■■ 45.8
RBM5P52756 LTBR-202ENST00000440421 729 ntTSL 217.06■□□□□ 0.323e-10■■■■■ 45.8
RBM5P52756 LTBR-213ENST00000544454 632 ntTSL 516.79■□□□□ 0.283e-10■■■■■ 45.8
RBM5P52756 LTBR-204ENST00000444814 1553 ntTSL 215.04■□□□□ -03e-10■■■■■ 45.8
RBM5P52756 DNMT1-204ENST00000585843 911 ntTSL 317.19■□□□□ 0.349e-13■■■■■ 45.4
RBM5P52756 DNMT1-224ENST00000591764 341 ntTSL 1 (best)10.43□□□□□ -0.749e-13■■■■■ 45.4
RBM5P52756 DNMT1-219ENST00000589349 603 ntTSL 410.27□□□□□ -0.779e-13■■■■■ 45.4
RBM5P52756 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.742e-23■■■■■ 44.7
RBM5P52756 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.462e-23■■■■■ 44.7
RBM5P52756 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.322e-23■■■■■ 44.7
RBM5P52756 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.032e-23■■■■■ 44.7
RBM5P52756 TJP2-201ENST00000348208 4058 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.122e-23■■■■■ 44.7
RBM5P52756 TJP2-209ENST00000539225 3838 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.262e-23■■■■■ 44.7
RBM5P52756 APOA2-209ENST00000481511 655 ntTSL 515.84■□□□□ 0.134e-14■■■■■ 44.6
RBM5P52756 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.04□□□□□ -1.764e-14■■■■■ 44.6
RBM5P52756 WDR4-206ENST00000479429 759 ntTSL 527.29■■□□□ 1.961e-12■■■■■ 44.4
RBM5P52756 SPHK1-206ENST00000590379 588 ntTSL 325.86■■□□□ 1.731e-12■■■■■ 44.4
RBM5P52756 SPHK1-208ENST00000591651 541 ntTSL 425.64■■□□□ 1.71e-12■■■■■ 44.4
RBM5P52756 WDR4-204ENST00000470658 901 ntTSL 525.58■■□□□ 1.691e-12■■■■■ 44.4
RBM5P52756 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.371e-12■■■■■ 44.4
RBM5P52756 SPHK1-205ENST00000588682 858 ntTSL 323.62■■□□□ 1.371e-12■■■■■ 44.4
RBM5P52756 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC22.78■■□□□ 1.241e-12■■■■■ 44.4
RBM5P52756 WDR4-207ENST00000492742 2205 ntTSL 222.45■■□□□ 1.181e-12■■■■■ 44.4
RBM5P52756 AP1M1-212ENST00000590945 549 ntTSL 421.18■□□□□ 0.981e-12■■■■■ 44.4
RBM5P52756 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.841e-12■■■■■ 44.4
RBM5P52756 SPHK1-209ENST00000591762 2502 ntTSL 219.94■□□□□ 0.781e-12■■■■■ 44.4
RBM5P52756 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC18.73■□□□□ 0.591e-12■■■■■ 44.4
RBM5P52756 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC18.71■□□□□ 0.591e-12■■■■■ 44.4
RBM5P52756 AP1M1-209ENST00000589991 625 ntTSL 217.86■□□□□ 0.451e-12■■■■■ 44.4
RBM5P52756 AP1M1-210ENST00000590263 546 ntTSL 517.3■□□□□ 0.361e-12■■■■■ 44.4
RBM5P52756 WDR4-203ENST00000463902 609 ntTSL 317.15■□□□□ 0.341e-12■■■■■ 44.4
RBM5P52756 WDR4-205ENST00000476326 1977 ntTSL 1 (best)16.47■□□□□ 0.231e-12■■■■■ 44.4
RBM5P52756 AP1M1-208ENST00000589822 562 ntTSL 416.44■□□□□ 0.221e-12■■■■■ 44.4
RBM5P52756 AP1M1-203ENST00000444449 2311 ntTSL 1 (best) BASIC14.59□□□□□ -0.071e-12■■■■■ 44.4
RBM5P52756 AP1M1-213ENST00000591775 564 ntTSL 413.58□□□□□ -0.241e-12■■■■■ 44.4
RBM5P52756 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.121e-12■■■■■ 44.4
RBM5P52756 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC22.33■■□□□ 1.179e-12■■■■■ 43.9
RBM5P52756 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.849e-12■■■■■ 43.9
RBM5P52756 SREBF2-202ENST00000424354 5699 ntTSL 1 (best)15.88■□□□□ 0.139e-12■■■■■ 43.9
RBM5P52756 SREBF2-208ENST00000491541 4043 ntTSL 1 (best)10.92□□□□□ -0.669e-12■■■■■ 43.9
RBM5P52756 NCL-207ENST00000461347 3967 ntTSL 216.09■□□□□ 0.173e-12■■■■■ 43.4
RBM5P52756 NCL-201ENST00000322723 4034 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.293e-12■■■■■ 43.4
RBM5P52756 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.672e-10■■■■■ 42.9
RBM5P52756 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.662e-10■■■■■ 42.9
RBM5P52756 LAMA5-209ENST00000481120 386 ntTSL 228.28■■■□□ 2.126e-12■■■■■ 42.4
RBM5P52756 SNHG17-207ENST00000449469 2138 ntTSL 218.24■□□□□ 0.516e-12■■■■■ 42.4
RBM5P52756 SNHG17-204ENST00000423536 517 ntTSL 2 BASIC10.67□□□□□ -0.76e-12■■■■■ 42.4
RBM5P52756 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.331e-11■■■■■ 41.3
RBM5P52756 UNC93A-204ENST00000503433 775 ntTSL 216.28■□□□□ 0.21e-11■■■■■ 41.3
RBM5P52756 TRIM25-205ENST00000572021 1555 ntTSL 1 (best)14.61□□□□□ -0.071e-11■■■■■ 41.3
RBM5P52756 TRIM25-202ENST00000537230 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.121e-11■■■■■ 41.3
RBM5P52756 UNC93A-201ENST00000230256 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.161e-11■■■■■ 41.3
RBM5P52756 UNC93A-202ENST00000366829 1810 ntTSL 1 (best) BASIC13.48□□□□□ -0.251e-11■■■■■ 41.3
RBM5P52756 UNC93A-203ENST00000366830 574 ntTSL 310.11□□□□□ -0.791e-11■■■■■ 41.3
RBM5P52756 TRIM25-206ENST00000572550 519 ntTSL 56.84□□□□□ -1.311e-11■■■■■ 41.3
RBM5P52756 PPP1R12C-203ENST00000586197 472 ntTSL 519.27■□□□□ 0.682e-11■■■■■ 40.3
RBM5P52756 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC27.6■■■□□ 2.011e-6■■■■■ 40.3
RBM5P52756 RFNG-204ENST00000578676 1078 ntTSL 326.01■■□□□ 1.751e-6■■■■■ 40.3
RBM5P52756 RFNG-207ENST00000580953 2082 ntTSL 521.84■■□□□ 1.091e-6■■■■■ 40.3
RBM5P52756 RFNG-208ENST00000582478 3107 ntTSL 1 (best)18.85■□□□□ 0.611e-6■■■■■ 40.3
RBM5P52756 RFNG-212ENST00000584838 721 ntTSL 516.97■□□□□ 0.311e-6■■■■■ 40.3
RBM5P52756 RFNG-202ENST00000429557 994 ntTSL 5 BASIC15.93■□□□□ 0.141e-6■■■■■ 40.3
RBM5P52756 RBM5-211ENST00000462025 573 ntTSL 415.49■□□□□ 0.071e-7■■■■■ 39.9
RBM5P52756 RBM5-203ENST00000404526 580 ntTSL 314.22□□□□□ -0.131e-7■■■■■ 39.9
RBM5P52756 RBM5-226ENST00000496179 1406 ntTSL 510.58□□□□□ -0.721e-7■■■■■ 39.9
RBM5P52756 RBM5-202ENST00000395174 938 ntTSL 39.62□□□□□ -0.871e-7■■■■■ 39.9
RBM5P52756 APOA2-208ENST00000481413 927 ntTSL 219.31■□□□□ 0.684e-14■■■■■ 39.4
RBM5P52756 APOA2-204ENST00000464492 530 ntTSL 3 BASIC18.39■□□□□ 0.534e-14■■■■■ 39.4
RBM5P52756 APOA2-206ENST00000469730 265 ntTSL 514.05□□□□□ -0.164e-14■■■■■ 39.4
RBM5P52756 APOA2-203ENST00000463812 401 ntTSL 2 BASIC11.77□□□□□ -0.534e-14■■■■■ 39.4
RBM5P52756 APOA2-202ENST00000463273 469 ntTSL 1 (best)11.16□□□□□ -0.624e-14■■■■■ 39.4
RBM5P52756 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.54e-14■■■■■ 39.4
RBM5P52756 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.56□□□□□ -1.524e-14■■■■■ 39.4
RBM5P52756 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.21□□□□□ -1.94e-14■■■■■ 39.4
RBM5P52756 HADHA-201ENST00000380649 3037 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.514e-11■■■■■ 39.3
RBM5P52756 CIAO1-204ENST00000491394 748 ntTSL 221.2■□□□□ 0.989e-11■■■■■ 38.2
RBM5P52756 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC19.24■□□□□ 0.676e-7■■■■■ 38.1
RBM5P52756 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.91■□□□□ 0.466e-7■■■■■ 38.1
RBM5P52756 GIT2-212ENST00000548655 1061 ntTSL 512.8□□□□□ -0.366e-7■■■■■ 38.1
RBM5P52756 GIT2-214ENST00000550186 1977 ntTSL 212.55□□□□□ -0.46e-7■■■■■ 38.1
RBM5P52756 GIT2-210ENST00000548000 595 ntTSL 412.31□□□□□ -0.446e-7■■■■■ 38.1
RBM5P52756 GIT2-204ENST00000361006 5444 ntTSL 5 BASIC12.19□□□□□ -0.466e-7■■■■■ 38.1
RBM5P52756 GIT2-216ENST00000551209 2127 ntTSL 5 BASIC12.12□□□□□ -0.476e-7■■■■■ 38.1
RBM5P52756 GIT2-203ENST00000355312 5466 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.566e-7■■■■■ 38.1
RBM5P52756 GIT2-205ENST00000457474 5291 ntTSL 1 (best) BASIC10.86□□□□□ -0.676e-7■■■■■ 38.1
RBM5P52756 GIT2-213ENST00000549999 3518 ntTSL 58.59□□□□□ -1.036e-7■■■■■ 38.1
RBM5P52756 GIT2-215ENST00000550480 555 ntTSL 55.17□□□□□ -1.586e-7■■■■■ 38.1
RBM5P52756 RBM5-212ENST00000464087 5616 ntTSL 29.84□□□□□ -0.831e-7■■■■■ 37.7
RBM5P52756 RBM5-201ENST00000347869 3188 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.931e-7■■■■■ 37.7
RBM5P52756 SYNJ2-206ENST00000485863 810 ntTSL 323.61■■□□□ 1.373e-8■■■■■ 37.3
RBM5P52756 SH3PXD2A-204ENST00000420222 3251 ntTSL 215.91■□□□□ 0.146e-20■■■■■ 37.2
RBM5P52756 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.086e-20■■■■■ 37.2
RBM5P52756 SH3PXD2A-201ENST00000315994 5504 ntTSL 1 (best)15.18■□□□□ 0.026e-20■■■■■ 37.2
RBM5P52756 SH3PXD2A-202ENST00000355946 11245 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.796e-20■■■■■ 37.2
RBM5P52756 GREB1-207ENST00000432985 2052 ntTSL 1 (best)13.72□□□□□ -0.212e-6■■■■■ 37.1
RBM5P52756 RAB3GAP2-201ENST00000237724 821 ntTSL 319.76■□□□□ 0.753e-9■■■■■ 36.7
RBM5P52756 RAB3GAP2-204ENST00000474178 539 ntTSL 412.81□□□□□ -0.363e-9■■■■■ 36.7
RBM5P52756 RAB3GAP2-202ENST00000358951 7257 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.43e-9■■■■■ 36.7
RBM5P52756 RAB3GAP2-207ENST00000478976 575 ntTSL 411.64□□□□□ -0.553e-9■■■■■ 36.7
Retrieved 100 of 6,546 protein–RNA pairs in 523.9 ms