RNA–Protein interactions for RNA: ENST00000590379.5

SPHK1-206, Transcript of sphingosine kinase 1, humanhuman

TSL 3

Gene SPHK1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-206ENST00000590379 NISCHQ9Y2I1 1504 aa50.85■■■■■ 5.73
SPHK1-206ENST00000590379 CCDC180Q9P1Z9 1646 aa45.26■■■■■ 4.84
SPHK1-206ENST00000590379 ABCC9O60706 1549 aa44.4■■■■■ 4.7
SPHK1-206ENST00000590379 RB1CC1Q8TDY2 1594 aa42.58■■■■■ 4.41
SPHK1-206ENST00000590379 DCAF8L2P0C7V8 631 aa42.55■■■■■ 4.4
SPHK1-206ENST00000590379 NACADO15069 1562 aa42.52■■■■■ 4.4
SPHK1-206ENST00000590379 ZCCHC6Q5VYS8 1495 aaKnown RBP42.36■■■■■ 4.37
SPHK1-206ENST00000590379 MYO15BQ96JP2 1530 aa42.24■■■■■ 4.35
SPHK1-206ENST00000590379 DCAF1Q9Y4B6 1507 aa42.07■■■■■ 4.33
SPHK1-206ENST00000590379 UNC13AQ9UPW8 1703 aa41.64■■■■■ 4.26
SPHK1-206ENST00000590379 PABPN1Q86U42 306 aaKnown RBP eCLIP41.56■■■■■ 4.241e-7■□□□□ 10.2
SPHK1-206ENST00000590379 SCRIBQ14160 1630 aa41.29■■■■■ 4.2
SPHK1-206ENST00000590379 BICRAQ9NZM4 1560 aa41.23■■■■■ 4.19
SPHK1-206ENST00000590379 DNAJC5BQ9UF47 199 aa41.18■■■■■ 4.18
SPHK1-206ENST00000590379 SHROOM4Q9ULL8 1493 aa40.83■■■■■ 4.13
SPHK1-206ENST00000590379 EIF4G1Q04637 1599 aaKnown RBP40.18■■■■■ 4.02
SPHK1-206ENST00000590379 CC2D2AQ9P2K1 1620 aa40.05■■■■■ 4
SPHK1-206ENST00000590379 CECR2Q9BXF3 1484 aa39.91■■■■□ 3.98
SPHK1-206ENST00000590379 SMARCA4P51532 1647 aa39.48■■■■□ 3.91
SPHK1-206ENST00000590379 BAZ1AQ9NRL2 1556 aaPredicted RBP39.45■■■■□ 3.91
SPHK1-206ENST00000590379 SMARCA2P51531 1590 aa39.23■■■■□ 3.87
SPHK1-206ENST00000590379 ATAD2BQ9ULI0 1458 aa39.23■■■■□ 3.87
SPHK1-206ENST00000590379 NCAPD3P42695 1498 aa39.19■■■■□ 3.86
SPHK1-206ENST00000590379 MROH2BQ7Z745 1585 aa39.19■■■■□ 3.86
SPHK1-206ENST00000590379 PEG3Q9GZU2 1588 aa39.07■■■■□ 3.84
SPHK1-206ENST00000590379 HMGXB3Q12766 1538 aa39.04■■■■□ 3.84
SPHK1-206ENST00000590379 BAZ1BQ9UIG0 1483 aaKnown RBP38.96■■■■□ 3.83
SPHK1-206ENST00000590379 WIZO95785 1651 aa38.81■■■■□ 3.8
SPHK1-206ENST00000590379 RSF1Q96T23 1441 aaPredicted RBP38.74■■■■□ 3.79
SPHK1-206ENST00000590379 TOP2AP11388 1531 aaKnown RBP38.38■■■■□ 3.74
SPHK1-206ENST00000590379 NESP48681 1621 aa38.3■■■■□ 3.72
SPHK1-206ENST00000590379 ERCC6Q03468 1493 aa38.28■■■■□ 3.72
SPHK1-206ENST00000590379 LAMC3Q9Y6N6 1575 aa38.21■■■■□ 3.71
SPHK1-206ENST00000590379 CADPSQ9ULU8 1353 aa38.07■■■■□ 3.69
SPHK1-206ENST00000590379 PDS5BQ9NTI5 1447 aa37.95■■■■□ 3.67
SPHK1-206ENST00000590379 CUX2O14529 1486 aa37.93■■■■□ 3.66
SPHK1-206ENST00000590379 CCDC88BA6NC98 1476 aa37.91■■■■□ 3.66
SPHK1-206ENST00000590379 KIF21AQ7Z4S6 1674 aa37.88■■■■□ 3.65
SPHK1-206ENST00000590379 CFTRP13569 1480 aa37.84■■■■□ 3.65
SPHK1-206ENST00000590379 SUPT5HO00267 1087 aaKnown RBP37.84■■■■□ 3.65
SPHK1-206ENST00000590379 THOC2Q8NI27 1593 aaKnown RBP37.69■■■■□ 3.62
SPHK1-206ENST00000590379 PRDM2Q13029 1718 aa37.67■■■■□ 3.62
SPHK1-206ENST00000590379 FANCD2Q9BXW9 1451 aa37.65■■■■□ 3.62
SPHK1-206ENST00000590379 CEP164Q9UPV0 1460 aa37.62■■■■□ 3.61
SPHK1-206ENST00000590379 MRC2Q9UBG0 1479 aa37.55■■■■□ 3.6
SPHK1-206ENST00000590379 WDR62O43379 1518 aa37.41■■■■□ 3.58
SPHK1-206ENST00000590379 DNAJC5Q9H3Z4 198 aa37.32■■■■□ 3.56
SPHK1-206ENST00000590379 URB2Q14146 1524 aaKnown RBP37.26■■■■□ 3.55
SPHK1-206ENST00000590379 ABCC8Q09428 1581 aa37.08■■■■□ 3.53
SPHK1-206ENST00000590379 TOPBP1Q92547 1522 aa37.05■■■■□ 3.52
SPHK1-206ENST00000590379 DNMBPQ6XZF7 1577 aa37.03■■■■□ 3.52
SPHK1-206ENST00000590379 IFT140Q96RY7 1462 aa36.82■■■■□ 3.49
SPHK1-206ENST00000590379 CUX1P39880 1505 aa36.77■■■■□ 3.48
SPHK1-206ENST00000590379 POLA1P09884 1462 aaPredicted RBP36.73■■■■□ 3.47
SPHK1-206ENST00000590379 FGD5Q6ZNL6 1462 aa36.66■■■■□ 3.46
SPHK1-206ENST00000590379 TARBP1Q13395 1621 aaKnown RBP36.64■■■■□ 3.46
SPHK1-206ENST00000590379 ZNF608Q9ULD9 1512 aaPredicted RBP36.63■■■■□ 3.45
SPHK1-206ENST00000590379 SOGA1O94964 1423 aa36.59■■■■□ 3.45
SPHK1-206ENST00000590379 RAD54L2Q9Y4B4 1467 aa36.56■■■■□ 3.44
SPHK1-206ENST00000590379 WRNQ14191 1432 aaPredicted RBP eCLIP36.56■■■■□ 3.44
SPHK1-206ENST00000590379 EIF4G3O43432 1585 aaKnown RBP36.53■■■■□ 3.44
SPHK1-206ENST00000590379 BIVM-ERCC5R4GMW8 1640 aa36.49■■■■□ 3.43
SPHK1-206ENST00000590379 TOP2BQ02880 1626 aa36.48■■■■□ 3.43
SPHK1-206ENST00000590379 SYNJ1O43426 1573 aa36.46■■■■□ 3.43
SPHK1-206ENST00000590379 OSCARQ8IYS5 282 aa36.45■■■■□ 3.43
SPHK1-206ENST00000590379 AQRO60306 1485 aaKnown RBP eCLIP36.43■■■■□ 3.422e-14■■■■■ 57.5
SPHK1-206ENST00000590379 WDR97A6NE52 1622 aa36.38■■■■□ 3.41
SPHK1-206ENST00000590379 TDRD9Q8NDG6 1382 aaKnown RBP36.38■■■■□ 3.41
SPHK1-206ENST00000590379 ABCA10Q8WWZ4 1543 aa36.29■■■■□ 3.4
SPHK1-206ENST00000590379 GAPVD1Q14C86 1478 aa36.18■■■■□ 3.38
SPHK1-206ENST00000590379 GRIN2BQ13224 1484 aa36.17■■■■□ 3.38
SPHK1-206ENST00000590379 ABCA5Q8WWZ7 1642 aa36.16■■■■□ 3.38
SPHK1-206ENST00000590379 FBLN2P98095 1184 aa36.15■■■■□ 3.38
SPHK1-206ENST00000590379 PBRM1Q86U86 1689 aa36.15■■■■□ 3.38
SPHK1-206ENST00000590379 SNAPC4Q5SXM2 1469 aa36.11■■■■□ 3.37
SPHK1-206ENST00000590379 CHD1O14646 1710 aa36.09■■■■□ 3.37
SPHK1-206ENST00000590379 MAGI1Q96QZ7 1491 aaPredicted RBP36.07■■■■□ 3.37
SPHK1-206ENST00000590379 TRIM41Q8WV44 630 aa36.02■■■■□ 3.36
SPHK1-206ENST00000590379 CHMP7Q8WUX9 453 aaPredicted RBP35.95■■■■□ 3.35
SPHK1-206ENST00000590379 SYNJ2O15056 1496 aa35.93■■■■□ 3.34
SPHK1-206ENST00000590379 ERICH3Q5RHP9 1530 aa35.88■■■■□ 3.33
SPHK1-206ENST00000590379 ADAMTS12P58397 1594 aa35.82■■■■□ 3.32
SPHK1-206ENST00000590379 KIF27Q86VH2 1401 aa35.81■■■■□ 3.32
SPHK1-206ENST00000590379 FHAD1B1AJZ9 1412 aa35.75■■■■□ 3.31
SPHK1-206ENST00000590379 ARHGEF11O15085 1522 aa35.73■■■■□ 3.31
SPHK1-206ENST00000590379 RIMBP3CA6NJZ7 1639 aa35.73■■■■□ 3.31
SPHK1-206ENST00000590379 RIMBP3BA6NNM3 1639 aa35.73■■■■□ 3.31
SPHK1-206ENST00000590379 RIMBP3Q9UFD9 1639 aa35.73■■■■□ 3.31
SPHK1-206ENST00000590379 GRIN2AQ12879 1464 aa35.7■■■■□ 3.31
SPHK1-206ENST00000590379 CLASP1Q7Z460 1538 aa35.63■■■■□ 3.29
SPHK1-206ENST00000590379 IGF1RP08069 1367 aa35.61■■■■□ 3.29
SPHK1-206ENST00000590379 CUL7Q14999 1698 aa35.59■■■■□ 3.29
SPHK1-206ENST00000590379 CYB5RLQ6IPT4 315 aa35.59■■■■□ 3.29
SPHK1-206ENST00000590379 CEP170Q5SW79 1584 aa35.51■■■■□ 3.28
SPHK1-206ENST00000590379 NUP160Q12769 1436 aa35.51■■■■□ 3.28
SPHK1-206ENST00000590379 RUSC2Q8N2Y8 1516 aa35.44■■■■□ 3.26
SPHK1-206ENST00000590379 ARAP1Q96P48 1450 aa35.44■■■■□ 3.26
SPHK1-206ENST00000590379 CARMIL1Q5VZK9 1371 aa35.44■■■■□ 3.26
SPHK1-206ENST00000590379 CHIC1Q5VXU3 224 aa35.28■■■■□ 3.24
SPHK1-206ENST00000590379 SHROOM2Q13796 1616 aa35.26■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms